KEGG   Escherichia coli K-12 MG1655: b3481
Entry
b3481             CDS       T00007                                 
Symbol
nikR
Name
(RefSeq) DNA-binding transcriptional repressor NikR
  KO
K07722  CopG family transcriptional regulator, nickel-responsive regulator
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eco03000]
    b3481 (nikR)
Transcription factors [BR:eco03000]
 Prokaryotic type
  Ribbon-helix-helix
   CopG family
    b3481 (nikR)
SSDB
Motif
Pfam: NikR_C RHH_1 RHH_5 RHH_8 RHH_3
Other DBs
NCBI-GeneID: 947995
NCBI-ProteinID: NP_417938
Pasteur: yhhG
RegulonDB: ECK120001473
ECOCYC: EG11519
ASAP: ABE-0011366
UniProt: P0A6Z6
Structure
Position
3618588..3618989
AA seq 133 aa
MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVY
EHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRG
VRHGHLQCLPKED
NT seq 402 nt   +upstreamnt  +downstreamnt
atgcaacgagtcaccatcacgcttgatgacgatttactggagacgctggacagcctgagc
cagcgtcgtggttataacaaccgttccgaagctatccgcgacattctgcgtagcgccctg
gcgcaagaggccacccagcagcacggcacgcaaggtttcgcggtgctgtcgtatgtgtat
gaacacgaaaaacgcgacttagccagccgcattgtctccacccagcatcatcaccacgac
ctctccgtcgccacgctgcatgtgcacatcaaccacgacgactgtctggaaatcgccgtg
ttgaaaggtgacatgggtgacgtgcagcattttgccgatgacgttatcgcccagcgcggc
gtgcggcacgggcatttgcagtgcttgccgaaggaagattga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   PASTEUR (1)   
   PROTHERM (27)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (8)   
   PDB (8)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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