KEGG   Escherichia coli K-12 MG1655: b3619
Entry
b3619             CDS       T00007                                 
Symbol
rfaD
Name
(RefSeq) ADP-L-glycero-D-mannoheptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
eco  Escherichia coli K-12 MG1655
Pathway
eco00540  Lipopolysaccharide biosynthesis
eco01100  Metabolic pathways
eco01250  Biosynthesis of nucleotide sugars
Module
eco_M00064  ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:eco00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    b3619 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:eco01005]
    b3619 (rfaD)
Enzymes [BR:eco01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     b3619 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:eco01005]
 Core region
  b3619 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 KR adh_short
Other DBs
NCBI-GeneID: 948134
NCBI-ProteinID: NP_418076
Pasteur: rfaD
RegulonDB: ECK120000829
ASAP: ABE-0011843
UniProt: P67910
Structure
Position
3793987..3794919
AA seq 310 aa
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaagccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctgaatatcgcagactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcgtgctcttcc
accaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaggagctg
ctgcactactgcctggagcgtgaaatcccgttcctgtacgcttcttccgcagccacctac
ggcggacgcacctccgactttattgaatcccgcgagtacgaaaaaccgttgaacgtctac
ggttactcaaaattcctgtttgatgaatatgttcgtcaaatcctgcctgaagcgaactcg
cagattgttggcttccgttatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacacccagcttaacaacggtgaatcaccgaagctg
tttgaaggtagcgagaacttcaaacgcgacttcgtctatgtgggcgacgtggctgatgtg
aatctgtggttcctggaaaatggcgtttccggcatcttcaatctcggtactggtcgtgcg
gaatccttccaggcggtagctgatgctacgctggcttatcacaagaaaggccagatcgaa
tacattccgttcccggataaactgaaaggccgctatcaggcgttcactcaggcagatctg
acaaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaacg
gaatacatggcctggctgaatcgcgacgcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   OC (1)   
   PASTEUR (1)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (8)   
   Pfam (8)   
All databases (38)   

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