KEGG   Escherichia coli K-12 MG1655: b3934Help
Entry
b3934             CDS       T00007                                 

Gene name
cytR
Definition
(RefSeq) DNA-binding transcriptional repressor CytR
  KO
K05499  LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
eco  Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:eco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eco03000]
    b3934 (cytR)
Transcription factors [BR:eco03000]
 Prokaryotic Type
  Helix-turn-helix
   LacI family
    b3934 (cytR)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peripla_BP_3 Peripla_BP_1 LacI Peripla_BP_4 HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID: 948427
NCBI-ProteinID: NP_418369
Pasteur: cytR
RegulonDB: ECK120000194
ECOCYC: EG10200
ASAP: ABE-0012853
UniProt: P0ACN7 A0A387D0W9
Structure
PDB: 

Position
complement(4123431..4124456)
Genome map
AA seq 341 aa AA seqDB search
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGR
NVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLII
TKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFDAVNYLY
EQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPR
YEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIRGSTRALP
NT seq 1026 nt NT seq  +upstreamnt  +downstreamnt
gtgaaagcgaagaagcaggaaactgccgcgaccatgaaagacgttgccctcaaggcaaaa
gtctctacagcgaccgtctcccgagcattaatgaatcccgataaagtctcccaggccacc
cgtaatcgggttgaaaaagcggcccgggaagtgggttatttaccgcagcctatggggcgc
aacgtcaagcgtaatgaatcccgcaccattctggtgattgtcccggatatctgcgatccc
ttctttagcgaaattattcgcggtatcgaagttacggcggcaaatcacggatatctggtg
ctgattggcgactgtgcgcatcaaaatcagcaggaaaaaacctttatcgatttgatcatc
accaagcaaattgatggcatgttgttgctgggttcaaggctgccgtttgatgccagcatt
gaggaacagcgtaatctgccgccgatggtgatggcgaacgaatttgcaccggagctggag
ctgcctacagttcatatcgacaatctgaccgccgcatttgatgcagtaaattatttatat
gagcaagggcataaacggattggctgtatagccggtcccgaagagatgccgctgtgtcac
taccgcctgcaaggctatgttcaggcgctgcgtcgctgcggcattatggttgatccgcaa
tacatcgcccgtggcgacttcaccttcgaagccggaagcaaagcgatgcagcagctgctt
gatcttccacaaccgcctactgctgtcttctgccatagcgatgtgatggcgctcggcgca
ctttctcaggcaaaacgccaggggctgaaagtcccggaagacctttccataatcggtttt
gataacatcgacctgacgcaattttgtgatccgccgctgacaaccatcgcgcagccgcgt
tacgaaatcggtcgggaagctatgctgttattgcttgatcaaatgcaggggcaacacgtt
ggcagtggctctcgtttaatggactgcgaacttatcatccggggatcaacacgcgcgtta
ccttaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   PASTEUR (1)   
   PRONIT (4)   
   REGULONDB (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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