KEGG   Escherichia coli APEC O78 (APEC): APECO78_06780
Entry
APECO78_06780     CDS       T02445                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
ecoa  Escherichia coli APEC O78 (APEC)
Pathway
ecoa03030  DNA replication
ecoa03430  Mismatch repair
ecoa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APECO78_06780 (holA)
   03430 Mismatch repair
    APECO78_06780 (holA)
   03440 Homologous recombination
    APECO78_06780 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecoa03032]
    APECO78_06780 (holA)
   03400 DNA repair and recombination proteins [BR:ecoa03400]
    APECO78_06780 (holA)
Enzymes [BR:ecoa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     APECO78_06780 (holA)
DNA replication proteins [BR:ecoa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     APECO78_06780 (holA)
DNA repair and recombination proteins [BR:ecoa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     APECO78_06780 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: AGC86089
Position
complement(1390296..1391327)
AA seq 343 aa
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQPQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttattgcaggaaagccaggacgctgttcgtcag
gtagctgcggcacaaggattcgaagaacaccacactttttccattgatcccaacactgac
tggaatgcgatcttttcgttatgccaggctatgagtctgtttgccagtcgacaaacgcta
ttgctgttgttaccagaaaacggaccgaatgcggcgatcaatgaacaacttctcacactc
accggacttctgcatgacgacctgctgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgcgcttgcgaatcgcagcgtgcaggtgacctgtcag
acaccggagcaggctcagcttccccgctgggttgctgcgcgcgcaaaacagctcaactta
gaactggatgacgctgcaaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggctcaggcactggagcgtttatcgctgctctggccagacggcaaattgacattaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcgttgcatattcttcagcaactgcgtctggaaggc
agcgagccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgccggggcatgatgggcgaggcgttaaatcgcttaagtcagccgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagctggaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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