KEGG   Escherichia coli LY180: LY180_00695
Entry
LY180_00695       CDS       T02846                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
ecol  Escherichia coli LY180
Pathway
ecol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ecol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LY180_00695 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecol03019]
    LY180_00695 (pcnB)
Enzymes [BR:ecol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     LY180_00695 (pcnB)
Messenger RNA biogenesis [BR:ecol03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LY180_00695 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-GeneID: 16977814
NCBI-ProteinID: AGW11396
Position
complement(159085..160398)
AA seq 437 aa
MTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRD
NIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVR
MLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCE
YHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLE
TAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRA
WKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDEEPSPR
RRTRRPRKRAPRREGTA
NT seq 1314 nt   +upstreamnt  +downstreamnt
gtgacggtgatcccgcgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgcc
ctgaaggtaatgtacaggctcaacaaagcgggatacgaagcctggctggttggcggcggc
gtgcgcgacctgttacttggcaaaaagccgaaagattttgacgtaaccactaacgccacg
cctgagcaggtgcgcaaactgttccgtaactgccgcctggtgggtcgccgtttccgtctg
gctcatgtgatgtttggcccggagattatcgaagttgcaaccttccgtggacaccacgaa
ggtaacgtcagcgaccgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgac
aacattttcggctccatcgaagaagacgcccagcgccgcgatttcactatcaacagcctc
tattacagcgtagcggattttaccgtccgtgattacgttggcggtatgaaggatctgaag
gacggcgttatccgtctgattggtaacccggaaacgcgctaccgtgaagatccggtacgt
atgctgcgcgcggtacgttttgccgccaaattgggtatgcgcatcagcccggaaaccgca
gaaccgatccctcgcctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaa
gaatcgcttaaactgctacaagcgggctacggttacgaaacctataagctgttgtgtgaa
tatcatctgttccagccgctgttcccgaccattacccgctacttcacggaaaatggcgac
agcccgatggagcggatcattgaacaggtgctgaagaataccgatacgcgtatccataac
gatatgcgcgtgaacccggcgttcttgtttgccgccatgttctggtacccactgctggag
acggcacagaagatcgcccaggaaagcggcctgacctatcacgacgctttcgcgctggcg
atgaacgacgtgctggacgaagcctgccgttcactggcaatcccgaaacgtctgacgacg
ttaacccgcgatatctggcagttgcagttgcgtatgtcccgtcgtcagggtaaacgcgca
tggaaactgctggagcatcctaagttccgtgcggcttatgacctgttggccttgcgagct
gaagttgaacgtaatgctgaactgcagcgtctggtgaaatggtggggtgagttccaggtt
tccgcaccaccagatcaaaaagggatgcttaacgagttggatgaagagccgtcaccgcgt
cgccgtactcgtcgtccacgcaaacgcgcaccgcgtcgtgagggtaccgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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