KEGG   Escherichia coli O81 ED1a (commensal): ECED1_3962
Entry
ECED1_3962        CDS       T00827                                 
Symbol
rpsM
Name
(GenBank) 30S ribosomal subunit protein S13
  KO
K02952  small subunit ribosomal protein S13
Organism
ecq  Escherichia coli O81 ED1a (commensal)
Pathway
ecq03010  Ribosome
Brite
KEGG Orthology (KO) [BR:ecq00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    ECED1_3962 (rpsM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:ecq03011]
    ECED1_3962 (rpsM)
Ribosome [BR:ecq03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    ECED1_3962 (rpsM)
  Bacteria
    ECED1_3962 (rpsM)
  Archaea
    ECED1_3962 (rpsM)
SSDB
Motif
Pfam: Ribosomal_S13 NFACT_N
Other DBs
NCBI-ProteinID: CAR10101
UniProt: B7N183
Position
complement(3883502..3883858)
AA seq 118 aa
MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEV
AKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK
NT seq 357 nt   +upstreamnt  +downstreamnt
gtggcccgtatagcaggcattaacattcctgatcataagcatgccgtaatcgcattaact
tcgatttatggcgtcggcaagacccgttctaaagccatcctggctgcagcgggtatcgct
gaagatgttaagatcagtgagctgtctgaaggacaaatcgacacgctgcgtgacgaagtt
gccaaatttgtcgttgaaggtgatctgcgccgtgaaatcagcatgagcatcaagcgcctg
atggatcttggttgctatcgcggtttgcgtcatcgtcgtggtctcccggttcgcggtcag
cgtaccaagaccaacgcacgtacccgtaagggtccgcgcaaaccgatcaagaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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