KEGG   Escherichia coli O8 IAI1 (commensal): ECIAI1_2893
Entry
ECIAI1_2893       CDS       T00828                                 
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5)-methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ecr  Escherichia coli O8 IAI1 (commensal)
Brite
KEGG Orthology (KO) [BR:ecr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecr03009]
    ECIAI1_2893 (rumA)
Enzymes [BR:ecr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     ECIAI1_2893 (rumA)
Ribosome biogenesis [BR:ecr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    ECIAI1_2893 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 Methyltransf_25 RrnaAD PCMT Met_10 Methyltransf_11 MTS Cons_hypoth95 Methyltransf_15 Methyltr_RsmB-F Methyltransf_23 Methyltransf_4 FtsJ Ubie_methyltran Methyltransf_12 PrmA MetW Methyltrans_SAM Methyltransf_32 CMAS TPMT
Other DBs
NCBI-ProteinID: CAQ99713
Position
complement(2964999..2966300)
AA seq 433 aa
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQ
YARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVI
ADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPKLEALLPKVRACL
GSLQVMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILE
TVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNF
TLPLAKQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKV
LLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHT
GHLESMVLFSRVK
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggcgcaattctactctgcaaaacgacgcacgacgacgcgtcagatcataaccgtttca
gtcaacgacctcgactcttttggtcagggcgtggcgcgacataacggcaaagcgttattt
attcctggattactgccacaggaaaacgcggaagttactgttactgaagataaaaaacag
tacgcccgcgctaaagtcgtgcgccggttaagcgatagcccggaacgcgaaacgccacgc
tgccctcattttggcgtatgcggtggctgtcagcaacaacacgccagcgtggatttacag
cagcgaagcaaaagtgcggcactcgcccgattaatgaaacacgaagtctctgaagtgatc
gccgatgttccctggggctatcgccgtcgcgcgcgtttaagtttgaactacttaccgaaa
acacagcaacttcagatgggctttcgcaaagcgggctccagtgacattgtcgacgttaaa
caatgccccattttagtgcccaaacttgaagcattgctgcccaaagtcagggcatgcctg
ggcagcttacaagttatgcgccatcttggtcatgttgaactggtacaggcaaccagcggc
acgctgatgattttgcgccataccgcaccgctaagttcggcagatcgcgaaaaactggaa
cgcttttcgcattctgaaggcctggatctgtatctcgcccccgatagtgagatactcgaa
accgtctctggtgagatgccctggtatgactcaaacgggttgcgcttaacttttagcccg
cgcgattttattcaggtcaatgcgggtgtgaaccaaaaaatggtagcgcgtgcgttggaa
tggctggatgtgcaacctgaagatcgcgtactggatctgttctgcggtatgggcaacttt
acactgccattggcgaaacaagcagccagtgtggtcggtgtagaaggtgttccggcgctg
gtggaaaaaggccagcagaatgcgcgtcttaatggtttacagaatgtgacgttttatcac
gaaaatcttgaagaagatgtcacaaagcagccgtgggcgaaaaacggcttcgataaagtg
ttgctggacccggcgcgagcaggtgccgcaggtgttatgcagcaaattataaaactggaa
cctattcgtatagtttatgtatcctgtaaccctgcaacgctggctcgggatagcgaagcg
ttattaaaagcaggatataccattgcgcgactggcgatgctggatatgttcccacacacg
ggacatctggaatcgatggtacttttctcgcgcgttaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (31)   

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