KEGG   Escherichia coli O7 K1 IAI39 (ExPEC): ECIAI39_2028
Entry
ECIAI39_2028      CDS       T00829                                 
Symbol
ycfD
Name
(GenBank) conserved hypothetical protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
ect  Escherichia coli O7:K1 IAI39 (ExPEC)
Brite
KEGG Orthology (KO) [BR:ect00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ect03009]
    ECIAI39_2028 (ycfD)
Enzymes [BR:ect01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     ECIAI39_2028 (ycfD)
Ribosome biogenesis [BR:ect03009]
 Prokaryotic type
  ribosomal protein modification factors
   ECIAI39_2028 (ycfD)
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_1 Cupin_2 AraC_binding Tup_N
Other DBs
NCBI-ProteinID: CAR18155
UniProt: A0A0H3MLR1
Position
2074756..2075877
AA seq 373 aa
MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGK
WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA
DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQG
DVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaactcactcttaactggcccgattttcttgaacgtcactggcagaaacgc
ccggtggtgttaaaacgcggctttaataattttattgacccgatctctccagacgagttg
gcgggtctggcgatggaaagcgaagtcgacagtcgactggtcagtcatcaggatggcaaa
tggcaggtcagccacggtccattcgaaagctacgatcatctcggtgaaactaactggtca
ttgttagtgcaagcagtgaaccactggcatgagccgaccgccgcgctaatgcgaccgttc
cgtgaactaccggactggcgtattgatgatctgatgatctctttttctgtaccgggcggc
ggcgtcggcccgcatctcgatcagtacgacgtgtttatcattcagggtaccggtcgtcgt
cgctggcgagtgggtgaaaagctgcaaatgaaacagcactgcccacatccggatctgtta
caggtcgatccgttcgaagccatcatcgatgaagagctggagcctggtgatattctttat
attccgccaggattcccgcatgaaggctacgcgctggaaaatgcgatgaactattccgtg
ggttttcgcgcgccaaatacgcgggaactgattagtggatttgccgattatgtgctgcaa
cgtgaactgggcggcaactactacagcgatcctgatgttccacctcgcgctcatcctgcg
gacgttctgccgcaagagatggataaactgcgtgagatgatgctcgaattgatcaaccag
ccggaacactttaagcaatggtttggcgagtttatatcccagtcacgtcatgaactggat
atcgcgccgccagagccgccttatcagccggatgaaatctacgatgcgctgaaacaaggt
gatgtgctggtgcgcctggggggtctgcgcgtattgcgcattggcgacgacgtgtatgcc
aatggtgagaagatcgattccccgcaccgtccggcactggatgcgctcgccagcaacatt
gcgctgaccgcggagaattttggcgatgcgctggaagatccgtcattcctcgcgatgctc
gcggcgctggtcaatagcggatactggttcttcgaagggtaa

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