KEGG T00425: APECO1

Escherichia coli APEC O1 (APEC): APECO1_2758

Entry

APECO1_2758       CDS       T00425

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

ecv Escherichia coli APEC O1 (APEC)

Brite

KEGG Orthology (KO) [BR:ecv00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecv03032]
    APECO1_2758 (gyrB)
   03400 DNA repair and recombination proteins [BR:ecv03400]
    APECO1_2758 (gyrB)
Enzymes [BR:ecv01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     APECO1_2758 (gyrB)
DNA replication proteins [BR:ecv03032]
Prokaryotic type
  DNA Topoisomerases
   APECO1_2758 (gyrB)
DNA repair and recombination proteins [BR:ecv03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      APECO1_2758 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB GyrB_insert DNA_gyraseB_C GyrB_hook Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

ABJ03174

UniProt:

A0A0H2Z4D4

Position

complement(4172070..4174484)

AA seq 804 aa
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII
VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVT
EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY
LLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR
YPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLF
EPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFE
QALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI

NT seq 2415 nt +upstreamnt +downstreamnt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagaaattatc
gtcaccattcacgccgataactctgtctccgtacaggatgatgggcgcggcattccgacc
ggtattcacccggaagagggcgtatcggcggcggaagtgatcatgaccgttctgcacgca
ggcggtaaatttgacgataactcctataaagtgtccggcggtctgcacggcgttggtgtt
tcggtagtaaacgccctgtcgcaaaaactggagctggttatccagcgcgagggtaaaatt
caccgtcagatctacgaacacggtgtaccgcaggccccgctggcggttaccggcgagact
gaaaaaaccggcactatggtgcgtttctggccaagccttgaaaccttcaccaatgtgacc
gagttcgaatatgacattctggcgaaacgtctgcgtgagttgtcgttcctcaactccggc
gtttccattcgtctgcgcgacaagcgcgacggcaaagaagaccacttccactatgaaggc
ggcatcaaggcgttcgttgaatatctgaacaagaacaaaacgccgatccacccgaatatc
ttctacttctccaccgaaaaagacggtattggcgtcgaagtggcgttgcagtggaacgat
ggcttccaggaaaacatctactgctttaccaacaacattccgcagcgtgacggcggtact
cacctggcaggtttccgtgcggcgatgacccgtactctgaacgcctacatggacaaagaa
ggctacagcaaaaaagccaaagtcagcgccaccggtgacgatgcgcgtgaaggcctgatt
gcggtcgtttccgtgaaagtgccggacccgaaattctcctcacagaccaaagacaaactg
gtttcttctgaggtgaaatcggcggttgaacagcagatgaacgaactgctggcggaatac
ctgctggaaaacccaaccgacgcgaaaatcgtggtcggcaaaattatcgatgctgcccgt
gcccgtgaagctgcgcgtcgcgcgcgtgaaatgacccgccgtaaaggtgcgctcgactta
gctggcctgccgggcaaactggcagactgccaggaacgcgatccggcgctttccgaactg
taccttgtggaaggggactccgcgggcggctctgcgaagcaggggcgtaaccgcaagaac
caggcgattctgccgctgaagggtaaaatcctcaacgtcgagaaagcgcgcttcgataag
atgctctcttctcaggaagtggcgacgcttatcaccgcgcttggttgtggtatcggtcgt
gacgagtacaacccggacaaactgcgttatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacattcgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcgttgaacgtggtcacgtctacatcgctcagccgccgctgtacaaagtgaagaaaggt
aagcaggaacagtacattaaagacgacgaagcgatggatcagtaccagatctctatcgcg
ctggatggcgcaacgctgcacaccaacgccagtgcaccggcgctggctggcgaagcgtta
gagaaactggtgtctgagtacaacgcgacgcagaaaatgatcaaccgcatggagcgtcgt
tatccgaaagcaatgctgaaagagcttatctatcagccgacgctgacggaagccgatctc
tctgatgagcagaccgttacccgctgggtgaacgcgctggtcagcgaactgaacgacaaa
gaacagcacggcagccagtggaagtttgatgtccataccaatgccgaacaaaacctgttc
gagccgattgttcgcgtgcgtacccacggtgtggatactgactatccgctggatcacgaa
tttatcactggcggcgaatatcgtcgtatctgcacgctgggtgagaaactgcgtggcttg
ctggaagaagatgcatttatcgaacgtggcgaacgtcgtcagccggtagccagcttcgag
caggcgctggactggctggtgaaagagtcccgtcgcggcctctccatccagcgttataaa
ggtctgggcgagatgaacccggaacagctgtgggaaaccaccatggacccggaaagccgt
cgtatgctgcgcgttaccgttaaagatgcgattgctgccgaccagttgttcactacgctt
atgggcgacgccgttgaaccgcgccgtgcgtttattgaagagaacgctctgaaagcggcg
aatatcgatatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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