KEGG   Escherichia coli APEC O1 (APEC): APECO1_963
Entry
APECO1_963        CDS       T00425                                 
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ecv  Escherichia coli APEC O1 (APEC)
Pathway
ecv02020  Two-component system
ecv02026  Biofilm formation - Escherichia coli
ecv02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ecv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    APECO1_963 (fliA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    APECO1_963 (fliA)
  09142 Cell motility
   02040 Flagellar assembly
    APECO1_963 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecv03021]
    APECO1_963 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ecv02035]
    APECO1_963 (fliA)
Transcription machinery [BR:ecv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     APECO1_963 (fliA)
Bacterial motility proteins [BR:ecv02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    APECO1_963 (fliA)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r4_2 UPF0147 UPF0122 TFIIE_alpha SapB_1
Other DBs
NCBI-ProteinID: ABJ01263
UniProt: A0A0H2YZN9
Position
complement(2006043..2006762)
AA seq 239 aa
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMETIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq 720 nt   +upstreamnt  +downstreamnt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatacgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactgctggacagtaatctgcgccag
cgggtgatggaaaccatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
tatcaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggctattaaacggttacgcactaaactgggtaagttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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