KEGG   Escherichia coli APEC O1 (APEC): APECO1_O1CoBM130
Entry
APECO1_O1CoBM130  CDS       T00425                                 
Symbol
yacC
Name
(GenBank) YacC
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ecv  Escherichia coli APEC O1 (APEC)
Pathway
ecv03030  DNA replication
ecv03430  Mismatch repair
ecv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APECO1_O1CoBM130 (yacC)
   03430 Mismatch repair
    APECO1_O1CoBM130 (yacC)
   03440 Homologous recombination
    APECO1_O1CoBM130 (yacC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecv03032]
    APECO1_O1CoBM130 (yacC)
   03400 DNA repair and recombination proteins [BR:ecv03400]
    APECO1_O1CoBM130 (yacC)
Enzymes [BR:ecv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     APECO1_O1CoBM130 (yacC)
DNA replication proteins [BR:ecv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     APECO1_O1CoBM130 (yacC)
DNA repair and recombination proteins [BR:ecv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     APECO1_O1CoBM130 (yacC)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ABD51700
UniProt: A0A0H2XL69
Position
pAPEC-O1-ColBM:109030..109878
AA seq 282 aa
MNNDELVTRRAQAIAEDRCFSKGRLRDEFRMKPAPGAEPVKWYKNSYGGRFAVYRIADCV
PMREKRPLTSKQQLAGQRLSVLSRLNSTSGRMARQAYDWLSLAPLFLDTETTGLDNTAEA
LEIGLTDAAGQVVFETRLKPTVAIGAQAAAVHGISEQALCGAPSWTDVARQLRHAIGDRP
VIIFNSRFDIRILKQTAAAHSDPADWLEEMTVYCAMELAAGYYGATNRYGTISLASAASQ
AGLTWEGQAHSTIADARMAAGVVNAIAAYHLELLQEQARLKI
NT seq 849 nt   +upstreamnt  +downstreamnt
atgaataatgatgagctggtcaccagacgtgcgcaggcgattgccgaagacaggtgtttc
tcgaaaggacgtctgcgcgatgaattcagaatgaagccagcccccggtgctgagccggtt
aagtggtataaaaatagttatggtggcaggttcgctgtataccgaattgcagactgtgtt
ccgatgcgtgagaaacgccctctgacgagtaaacaacagctggctggccagcggctttcc
gttttatcccgactaaacagcaccagtggccggatggcacggcaggcatatgactggctg
agtctggcaccactctttctggatactgaaacgacaggactggataataccgcggaagcc
ctggaaatcggcctgaccgatgcggccggtcaggtggtatttgaaaccaggctgaagccc
acggtcgccatcggggcgcaggccgccgccgtgcatggtatcagtgagcaggctctctgc
ggcgcaccatcatggacagatgtggcgcggcaactgcggcatgcaatcggagatcgacca
gtaattatctttaattcccggttcgacatccgcattctgaaacagactgcggccgcacat
agcgatccggctgactggctggaagaaatgacggtatattgtgcgatggagctggctgca
ggatattatggggccaccaaccgctatggcacgatttcactggccagtgctgccagccag
gccggactgacctgggaagggcaggcacactcaacgatcgccgacgcacggatggcggca
ggggtggtaaacgctattgctgcatatcatctggaactgctgcaggaacaggcccggctg
aaaatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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