KEGG   Escherichia coli O139 H28 E24377A (ETEC): EcE24377A_0924Help
Entry
EcE24377A_0924    CDS       T00590                                 

Gene name
rimK
Definition
(GenBank) ribosomal protein S6 modification protein
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
ecw  Escherichia coli O139:H28 E24377A (ETEC)
Brite
KEGG Orthology (KO) [BR:ecw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecw03009]
    EcE24377A_0924 (rimK)
Enzymes [BR:ecw01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.-  
     EcE24377A_0924 (rimK)
Ribosome biogenesis [BR:ecw03009]
 Prokaryotic Type
  ribosomal protein modification factors
   EcE24377A_0924 (rimK)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATP-grasp_3 ATPgrasp_ST Dala_Dala_lig_C ATPgrasp_YheCD Arm-DNA-bind_3 GARS_A
Motif
Other DBs
NCBI-ProteinID: ABV19505
UniProt: A7ZJS0
Structure
PDB: 

Position
941381..942283
Genome map
AA seq 300 aa AA seqDB search
MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASSIHYKGRKLPHFDA
VIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIA
HSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAYILVQEYI
KEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTM
ALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGIDIAGKMIRWIERHATTEYCLKTGG
NT seq 903 nt NT seq  +upstreamnt  +downstreamnt
gtgaaaattgccatattgtcccgggatggaacgctctattcgtgtaagcggctgcgtgaa
gccgctatacagcgcggtcacctggttgaaattcttgatccgctttcttgctacatgaac
ataaatcctgcggcgtcttctattcactacaaaggccgcaagttaccccattttgacgca
gtgatcccgcgtattggcaccgccattaccttttatgggacggcggcactgcgccagttc
gagatgctggggagctatccgctcaatgagtcggtcgccattgcccgggcgcgtgacaaa
ttgcgttccatgcaactgctggcgcgtcagggcatcgacctgcctgtcacgggcattgcg
cattcgccggatgataccagcgatttaatcgacatggtcggtggtgcgccgctggtggtc
aagctggttgaaggcacgcagggaattggcgtcgtgctggcggagacgcgtcaggcggcg
gaaagcgtgattgacgctttccgcggtctgaacgcgtatattctggtgcaggaatatatc
aaagaggcgcaagggtgcgatatccgctgtctggttgttggcgatgaagtggtcgctgcg
attgaacggcgggcgaaagagggcgattttcgttccaatttgcatcgtggcggcgcggca
agcgtcgccagtatcacaccacaggagcgtgaaatcgcgataaaagccgcgcgaacgatg
gcgctggacgttgctggtgtggatattctgcgtgctaatcgcgggccgttggtgatggag
gtgaatgcgtcgccggggctggaaggaatagaaaaaaccaccggtatcgacatcgcgggt
aaaatgatccgctggatcgaacgccacgctacgacagaatattgcctgaaaacgggtggt
tag

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