KEGG   Escherichia coli O9 HS (commensal): EcHS_A2149
Entry
EcHS_A2149        CDS       T00591                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
ecx  Escherichia coli O9 HS (commensal)
Pathway
ecx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ecx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    EcHS_A2149 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecx03400]
    EcHS_A2149 (sbcB)
Enzymes [BR:ecx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     EcHS_A2149 (sbcB)
DNA repair and recombination proteins [BR:ecx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     EcHS_A2149 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EcHS_A2149 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EcHS_A2149 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: ABV06438
UniProt: A0A7I6GZL5
Position
2128610..2130037
AA seq 475 aa
MMNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ
PGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNVFYRNF
YDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNA
HDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMALIDVPQMKPLVHVSGMFGAWR
GNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDNAAVPVKL
VHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKILRENPQVREKVVAIFAEAEPFTPS
DNVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFVDKRIEKLLFNYRARNFPGTLD
YAEQQRWLEHRRQVFTPEFLQGYAEEIQMLAQQYADDKEKVALLKALWQYAEEIV
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgatgaatgacggtaagcaacaatctacctttttgtttcacgattacgaaacctttggc
acgcatcccgcgttagatcgccctgcacagttcgcagccattcgcaccgatagcgaattc
aatgtcatcggcgaacccgaagtcttttactgcaagcccgcggatgactatttaccccag
cctggagcagtattaattaccggtattaccccgcaggaagctcgggcgaaaggagaaaac
gaagccgcatttgccgcccgtattcactcgctttttaccgtaccgaagacctgtattctg
ggctacaacaatgtgcgtttcgacgatgaagtcacacgcaacgttttttatcgtaatttc
tacgatccttacgcctggagctggcagcatgataactcgcgctgggatttactggatgtt
atgcgtgcctgttatgccctgcgcccggaaggaataaactggcctgaaaatgatgacggt
ctaccgagctttcgccttgagcatttaaccaaagcgaatggtattgaacatagcaacgcc
cacgatgcgatggctgatgtgtacgccactattgcgatggcaaagctggtaaaaacgcgt
cagccacgcctgtttgattatctctttacccatcgcaataaacacaaactgatggcgttg
attgatgttccgcagatgaaacccctggttcacgtttccggaatgtttggggcatggcgc
ggcaataccagctgggtagcaccgctggcgtggcatcctgaaaatcgcaatgccgtaatt
atggtggatttggcaggagacatttcgccattactggaactggatagcgacacattgcgc
gagcgtctatataccgcaaaagccgatcttggcgataacgccgccgttccggttaaactg
gtgcatatcaataaatgtccggtgctggcccaggcgaatacgctacgcccggaagatgcc
gaccgactgggaattaatcgtcagcattgcctcgataacctgaaaattctgcgtgaaaat
ccgcaagtgcgtgaaaaagtggtggcgatattcgcggaagccgaaccgtttacgccttca
gataacgtggatgcacagctttataatggctttttcagtgacgccgatcgtgcagcaatg
aaaattgtgcttgaaaccgagccgcgtaatttaccggcactggatatcacttttgttgat
aaacggattgaaaagctgttgttcaattatcgggcacgcaacttcccggggacgctggat
tatgccgagcagcaacgctggctggagcaccgccgccaggtcttcacgccagagttttta
caaggctatgcagaagagattcagatgctggcgcagcagtatgccgacgataaagaaaaa
gtggcgctgttaaaagcgctttggcagtacgcggaagagattgtctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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