KEGG   Edaphobacter sp. 12200R-103: GWR55_02465
Entry
GWR55_02465       CDS       T06408                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
eda  Edaphobacter sp. 12200R-103
Pathway
eda03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:eda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GWR55_02465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eda03400]
    GWR55_02465
Enzymes [BR:eda01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     GWR55_02465
DNA repair and recombination proteins [BR:eda03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     GWR55_02465
SSDB
Motif
Pfam: AP_endonuc_2 PRMT5_TIM
Other DBs
NCBI-ProteinID: QHS50735
UniProt: A0A6B9YNB6
Position
583996..584862
AA seq 288 aa
MATAKKRIGVHVGTAGGVWTAVDRAVAAGANTFQIFSSSPRMWKAAAVKPADAAKMQELR
AKHDVNPVAIHASYLINLCSQTDSVRANSTTAFRGEVERALVLGAEFLVLHPGSWKGLTR
EQGLTYAAQSIEKAIDGIDFAGKNFKILIENTAGAEFSLGGKLEQVAELVDCLKACAPVA
VCLDTCHVHVSGYDIVSTDGYIETMKLVESTVGFDAVKVWHCNDAKAAMGSKLDRHEHIG
EGTIGAEAFRRLLHDERFSHCAFIAETPVDDPGDEARNVGVLRTLAAG
NT seq 867 nt   +upstreamnt  +downstreamnt
atggcaacggcgaagaagagaatcggtgtgcatgtgggaaccgcaggcggagtctggact
gcggtagatcgggcggtggctgcgggcgcgaatacgtttcagatcttttcctcgagtccg
cggatgtggaaggcggcggcggtcaaacccgcggatgcggcaaagatgcaggaactgcgg
gcgaagcacgatgtgaatccggtggcgatccatgccagctatctgatcaacctctgcagc
cagaccgacagtgtgcgggcgaattcaacgacggcgtttcgtggtgaggtggagcgagca
ctcgtgctgggagcggagtttctggtgctgcatccgggaagctggaagggactgacgcgc
gagcagggcctgacctacgcggcgcagtcgatcgaaaaggcgatcgacgggatcgacttt
gcgggaaaaaacttcaagattctgattgagaacacggcaggagcggagttttctcttggc
gggaagctggagcaggtggccgagttggtggattgcctgaaggcgtgcgctcccgtagcc
gtatgcctggatacatgccacgtccacgtttcgggctacgacatcgtttcgacagatggc
tacatcgagacgatgaagctggtggaatcaaccgtcggttttgacgccgtgaaggtatgg
cactgtaacgatgcaaaggcggccatgggttccaagctggaccggcatgagcacattggc
gaaggcacgattggcgcggaggcgtttcgccggttgctgcacgatgaacgcttcagccac
tgcgcgtttatcgcggagaccccggtggatgatcccggcgatgaagcgcgaaatgttggg
gtgctgagaacgctcgcggcgggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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