KEGG   Escherichia coli DH1: EcDH1_4000
Entry
EcDH1_4000        CDS       T01996                                 
Name
(GenBank) thiamine biosynthesis protein ThiC
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
edh  Escherichia coli DH1
Pathway
edh00730  Thiamine metabolism
edh01100  Metabolic pathways
edh01240  Biosynthesis of cofactors
Module
edh_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:edh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    EcDH1_4000
Enzymes [BR:edh01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     EcDH1_4000
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: ACX41600
Position
4318371..4320266
AA seq 631 aa
MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYITGTHPGVRVPMREIQLSPTLIGGSK
EQPQYEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWIDARGDTEELTVRSSDYTKA
RLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITPEMEFIAIRENMGRERIRSEV
LRHQHPGMSFGAHLPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA
KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AATQTIEMGMADMSENFRARGGEIYLRKEEA
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgtctgcaacaaaactgacccgccgcgaacaacgcgcccgggcccaacattttatcgac
accctggaaggcaccgcctttcccaactcaaaacgcatttatatcactggcacacacccc
ggcgtgcgcgtgccgatgcgtgagatccagcttagcccgacgctaattggcggtagcaaa
gaacagccgcagtacgaagaaaacgaagcgattccggtctacgacacctccggcccgtat
ggtgatccgcagattgccattaacgtgcagcaagggctggcaaaactacgccagccgtgg
atcgatgcgcgcggcgataccgaagaacttaccgtgcgcagttccgattacactaaagcg
cggctggcagatgatggcctcgacgaactgcgttttagcggcgtactaacaccaaaacgc
gccaaagcaggacgccgtgtcacccaactgcactacgcccgccagggcatcatcacgccg
gaaatggaattcatcgccatccgcgagaatatgggccgcgagcgcatccgtagcgaggtt
ttacgccaccagcatccgggaatgagctttggcgcacatctgccggaaaatatcactgcg
gaatttgtccgtgatgaagttgctgccggacgtgcgattatcccggccaacattaatcat
ccggaatcggagccgatgattattggtcgcaatttcctggtaaaagttaacgccaatatc
ggcaactcggcggtcacctcttccatcgaagaagaagtggaaaagctggtatggtccacg
cgctggggagcggatacggtgatggatctctccaccggtcgctatattcacgaaacccgc
gagtggattttgcgtaacagcccggtgccgatcggtacagtgccgatctaccaggcgctg
gagaaggttaacgggatcgccgaagatcttacctgggaagcgttccgcgacacgctgctg
gaacaggccgagcaaggtgtggattacttcactatccatgcgggcgtactgctgcgctat
gtgccgatgaccgcgaaacgcctgaccggtatcgtctctcgcggcggttcgattatggcg
aaatggtgcctctcccatcatcaggaaaatttcctctatcaacacttccgcgaaatttgt
gaaatctgtgccgcttatgacgtttcgctgtcgctgggcgacggtctgcgccccggttct
attcaggacgccaacgatgaagcgcagtttgccgagctgcatacgctgggcgaactgacc
aaaattgcctgggaatatgacgtgcaggtgatgattgaaggcccaggccacgtgccgatg
cagatgatccgccgcaatatgaccgaggagttagagcactgccacgaagcgccgttttac
actctggggccgctaactaccgatattgcgccgggctatgaccacttcacgtcggggatt
ggtgcggcgatgattggctggtttggctgcgcgatgctctgttacgtaacgccaaaagag
catctgggtctgcccaataaagaagatgttaagcaggggcttatcacctataagattgct
gcccacgccgctgacctggcgaaagggcatccgggcgcgcaaattcgcgataacgccatg
tcgaaagcccgcttcgaatttcgctgggaagaccagtttaatctggccctcgacccgttt
accgcccgcgcttatcacgatgaaaccctgccgcaagagtcaggtaaagtcgcccatttt
tgctccatgtgtgggccgaaattctgctcgatgaaaatcagccaggaagtgcgtgattac
gccgccacgcaaactattgaaatgggaatggcggatatgtcggagaacttccgtgccaga
ggcggagaaatctacctgcgtaaggaggaagcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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