KEGG   Edwardsiella sp. LADL05-105: AAZ33_03265
Entry
AAZ33_03265       CDS       T04005                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
edl  Edwardsiella sp. LADL05-105
Pathway
edl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:edl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAZ33_03265 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:edl03019]
    AAZ33_03265 (pcnB)
Enzymes [BR:edl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     AAZ33_03265 (pcnB)
Messenger RNA biogenesis [BR:edl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     AAZ33_03265 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd DUF5843
Other DBs
NCBI-ProteinID: AKR79304
Position
complement(725863..727266)
AA seq 467 aa
MFTRVANFCRRVLNRETDSVPEQESAHLSVVPRDQHTISRQQISENALKVLYRLNKSGYE
AYLVGGGVRDLLLGKRPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVA
TFRGHHEHADEGKNIAQQGKNGMLLRDNVYGNIEEDAQRRDFTINSLYYSVADFSVRDYT
GGLNDLRAGQIRLIGDPETRYREDPVRMLRAVRFAAKLQMSISPETAAPIAHLASLLRDI
PAARLFEEALKLLQAGYGYETYQKLREYHLFQPLFPVICRHFTPNGDSPMEKILAQVLKN
TDHRIQNDMRVNPAFLFAAMLWYPLIELAQKLTQEGGLTYHDAFALAMNDILDEQCRSLA
IPKRITALIRDIWTLQLRLSRRQGKRAHKLLEQPKFRAAYDLLALRAEAEHSAELQRLAD
WWGSFQTASVSQQKAMVNTLDDDGDGNAARRRRRPRRRTPRREGSGA
NT seq 1404 nt   +upstreamnt  +downstreamnt
atttttacccgagtcgccaacttttgccgtagagtgctaaatcgcgagacggacagcgta
ccggagcaggagtccgcccatctgagcgtagtcccgcgtgatcagcatacaatctcgcgc
cagcaaatcagcgaaaatgcgctgaaggttctgtaccgtctgaataaatcaggctatgaa
gcctatctggtcggcggcggcgtccgcgatctgctgctgggcaaacgcccgaaagatttc
gacgtgaccaccaacgccacgccggagcaggtgcgtaagctgttccgcaactgccgcctg
gtcgggcgccgttttcgtctggcgcacgtcatgttcggaccggagatcattgaggttgcg
accttccgcggccaccacgagcatgccgatgaaggcaagaatattgcccagcagggcaaa
aatggcatgctgctgcgcgacaacgtctacggcaatattgaagaagacgcccagcggcgt
gactttaccattaacagcctctattacagcgtggccgacttcagcgtccgtgactatacc
ggcggcctgaacgatctgcgcgccgggcaaattcgcctgatcggcgatcccgagactcgc
taccgggaggatccggtgcgcatgctgcgggcggtgcgtttcgccgccaagctgcagatg
tccatcagcccggagacggcggcgcccatcgcccatctggcatcgctgctgcgcgatatc
cccgccgcacgcctgtttgaagaggcgctgaagctgctgcaggcgggctatggctatgaa
acctatcagaagctgcgcgaataccatctgttccaaccgctgttcccggtgatctgccgc
cactttacccccaacggcgatagcccgatggagaagattctggcgcaggtgctgaagaac
accgatcaccgaattcagaacgatatgcgggtcaacccagcgtttctgtttgccgctatg
ctgtggtatccgctgatcgagctggcgcaaaagcttacccaagagggggggctgacctat
cacgatgcgttcgccctggcgatgaacgatatcctggatgagcagtgccgctctctggcg
attcccaagcgcatcaccgccctgatccgcgatatctggacgctgcagctgcgcctgtcg
cgccgccagggtaagcgcgcccacaaactgctggagcagcctaagttccgcgccgcttac
gatctgctggcgctgcgcgccgaggccgaacacagcgccgagctgcagcgtctggcggac
tggtggggctccttccagaccgccagcgtctcccagcaaaaggctatggtcaacaccctg
gacgacgatggcgacggtaacgccgcccgccgccgtcgcagaccgcgccgcagaacgccg
cgccgcgaaggcagcggtgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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