KEGG   Edwardsiella sp. LADL05-105: AAZ33_15080
Entry
AAZ33_15080       CDS       T04005                                 
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
edl  Edwardsiella sp. LADL05-105
Brite
KEGG Orthology (KO) [BR:edl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:edl03009]
    AAZ33_15080 (rluD)
Enzymes [BR:edl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     AAZ33_15080 (rluD)
Ribosome biogenesis [BR:edl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AAZ33_15080 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 TruB_N S4_2
Other DBs
NCBI-ProteinID: AKR78727
Position
complement(3381301..3382281)
AA seq 326 aa
MAQQVQLTATVTESQLGQRLDQTLAELFPDYSRSRIKEWILEGRVSVNGLIINKPKEKVL
GGEHIAIDALIEEENRWEAQDIALDIVYEDEDILVINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGTMT
AGGTVREPIARHPTKRTHMSVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
AHINHPLVGDPLYGGRPRPPRDASPEFICILREFDRQALHATMLRLYHPISGIEMEWHAP
IPEDMQRLIAVMQEDAETFKDEMDWL
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcacaacaagtacagctcaccgcgacggtgacggaatcccagctcggtcaacgctta
gatcagacgttggcggaattgttccctgattattcacgttcacgcataaaagagtggatc
ctggagggacgcgtcagcgtgaacgggctcatcatcaataagcctaaagagaaggttctg
ggtggtgagcatattgccattgatgccctgattgaggaagagaaccgttgggaggcgcag
gatatcgcgctggatatcgtctacgaggacgaggacatcctggtgatcaataagccgcgc
gatttggtggtgcaccccggcgccggtaacccggacggtacggtactcaacgcgctgctg
cattactatccgccgatcgccgacgttccgcgcgccgggatcgtgcaccggcttgataaa
gacactaccggcctgatggtggtcgctaaaacggtaccggcccagacgcgtctggtcgaa
tcgctgcagctgcgtgaaatcactcgtgaatatgaggctgtcgcgattggcaccatgacc
gcggggggcacggtgcgtgagccgatcgcgcgccatccgaccaagcgaacccacatgtcg
gtgcatccgatgggcaaaccggcggtgacgcactatcgcattatggagcacttccgcgcc
catacgcgcctgcgcctgcgtctggagaccgggcgtactcaccagatccgtgtgcatatg
gcacacattaaccatccgttggtgggcgatccgctgtacggcggccgcccgcgcccgccg
cgcgatgcgtcgccggagtttatctgcatcctacgcgagttcgatcgccaggcgctgcac
gcgaccatgctgcgcctgtatcacccgatcagcggtattgagatggagtggcatgcgccg
attccagaagatatgcagcgcctgattgcggtaatgcaggaggacgccgaaacctttaag
gatgagatggactggctatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system