KEGG   Electrophorus electricus (electric eel): 113589394
Entry
113589394         CDS       T05787                                 
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee03013  Nucleocytoplasmic transport
eee03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eee00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113589394 (thoc2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    113589394 (thoc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eee03019]
    113589394 (thoc2)
   03041 Spliceosome [BR:eee03041]
    113589394 (thoc2)
Messenger RNA biogenesis [BR:eee03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113589394 (thoc2)
Spliceosome [BR:eee03041]
 Complex C
  Other components
   EJC/TREX
    113589394 (thoc2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113589394 (thoc2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 113589394
NCBI-ProteinID: XP_026884828
Position
Unknown
AA seq 1425 aa
MATLILPTDWIKNWEKSGKNEFMQMCQDLAGKPNNEVFLKDLQTALYELCWHVVHGGLKV
DVAASILADVMELREDMPSVLADVFCVLDIETGCLEEKHKRDHFTQLVGACLFCVPDAVL
KERLDPETLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLVTELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYECRSDQDEFFIPLIKSYMCEHQTLC
HILGFKFKFHQEPNGETPSSLYHVAAALLQHNLIALEDLYVHLLPLDSTIIEEHKREILE
AKQIARKLTMVVVPSEKTDDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWQHAQSIM
EQMPSFYATSHKAIAIALCQLLHLLVEPLYRRAGVPKGAKGCLLKAPQSGHSPPPSESFE
DLSKDVFTMLGYLGPHLSHDPILFAKIVRLGKSFMKEYQSESKQEVKDKMDSLLSCFLSM
ADQVLLPALTLMECNACMSEELWGFFKLFPYQHRYRLYGQWKNETYGNHPLLVKVKAQTV
DRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSVDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYIAACEQVMAPVHEAVVSLHLPKVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKL
KMQIKAIDENTEMPLNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIY
TVASCTENESRRYGRFLCCMLETVTRWHSDKAIYEKECGNYPGFLTIFRASGFDGGNKAD
QLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPYYPKVLNLGQALEC
RVHKICQEEKEKRPDLYALAMGYSGQLKSRKVHMVPENEFHHKEPVSSTNPGGLQNGPGN
SGKPATSAPAASTIKSEDGAAEDTDKSKDKSQVAQKTASKTPTMVNKASSSNGSSTPNST
KGSREKEDKEKSGKEKKEKKEKNPASTPETKAGGKEKQQKEDRAGKDEKAADGKEKTPKG
DKEKRKDDKKDEKGKGDGKGADKEPSKERDVAKEGKLKESGKGEKNAAATSLKSPVPRSE
GAESEREQKRRKLDTHSPPSHSSAVKDGLNDFKESTSKVLPPFTI
NT seq 4278 nt   +upstreamnt  +downstreamnt
atggcgacgttgatcctccctactgattggatcaaaaactgggaaaaatccggaaaaaat
gagttcatgcagatgtgtcaggatcttgcagggaaacccaacaatgaagtgttccttaaa
gatcttcagacagctctttatgagctttgctggcatgttgtccacggtggtctcaaggtt
gatgtggctgccagcattttggctgatgttatggaactgcgagaagacatgccatctgtt
ttagctgatgttttttgtgtactagatattgagactggttgtctggaggagaagcacaag
cgtgaccattttacccagctggtgggagcatgtttgttctgtgtgcctgatgctgtgcta
aaagagaggctcgacccggagaccctggagtcccttggcctgatcaaacaggcacagcaa
ttcaaccagaagattgtcaaaattaagaccaagttattttacaagcagcagaagttcaac
ttgttacgggaggagaatgaaggctatgctaagcttgtgacagagctgggccaggacctg
tcggggaacatcaccagccatctcgttctggagagcatcaaatctttaataggatgcttt
aacttggacccaaaccgcgtgctggacatcatcttggaggtatatgagtgccgttcagac
caggatgagttcttcatccctttaatcaagtcctacatgtgtgagcaccagaccctgtgc
cacatccttggcttcaagttcaagttccatcaggaacccaatggagaaacaccatcatcg
ttgtatcatgttgctgcagctctcctccagcacaacctcattgccctggaggacctctac
gtgcatctgctgcccctggactccaccatcatcgaggaacacaagcgggagatcctggaa
gccaagcagattgctcgcaagctcaccatggtggtggttccctcagaaaagactgatgac
aaggagaaggagaaagagaaggaagaggaaaagaatgaaaagcctcctgataaccagaag
ttgggcttgctggaggctctgctcaggattggtgactggcagcatgctcagagcatcatg
gagcagatgccatccttctacgccacctcgcacaaggccatcgccatagcactgtgccaa
ctactgcacctccttgtggagcctctgtaccgcagggccggagtccccaagggtgccaaa
ggctgcctgctgaaggcaccacaaagtgggcactctcctcctccgtcggagagcttcgag
gacctatccaaggatgtcttcaccatgctaggctacctgggcccacacctgtcccatgac
cccatcctcttcgccaagattgtgcgcctgggcaagagctttatgaaggagtaccaaagt
gaaagcaagcaagaagtcaaggacaaaatggactcactgctcagctgcttcctcagtatg
gctgaccaggtgctgctgcccgccctcacgctgatggagtgcaacgcctgcatgtctgag
gaactctggggcttcttcaagctcttcccctaccagcacagatatcggctctacgggcag
tggaaaaacgagacatacggcaaccacccgctactggtgaaggtcaaggcccagacagtg
gaccgagccaaatacatcatgaagcgactgacgaaggagaacgtgaagccctcagggagg
cagattggcaagttgagccacagtaaccccaccattctctttgattatatcctctcgcag
atccagtggtacgacaacctcatcacccctgttgtggactctctaaaatacctcacctct
ctcaactacgatgtgctggcttattgcattatcgaagctctggctaacccagagaaagag
aagatgaagcacgatgacaccactatatcatcttggcttcaaagtcttgccagcctttgt
ggagctgttttccggaagtatcccatcgagttggctggcctgctgcagtatgtgaccaac
cagctgaaagcaggaaagagctttgacctgttgatcctgaaggaggtggtgcagaagatg
gcagggattgagatcacagacgagatgaccgtggagcagttggaggccatgactggagga
gagcagctcaaagcagagggaggctactttgggcagatcaggaacacaaagaagtcatcc
cagcgtttgaaggatgccctgctggatcacgagctggccctgccgctctgcctgctcatg
gctcagcagaggaatggtgtggtcttctctgagggaggagagaagcacctgaagctagtg
ggcaagctctacgatcagtgtcatgacaccttggtgcagttcggtggcttcttggcatcc
aacctcagcacggaggactacatcaagcgggtgccttctgtggacgtactctgtaatcag
ttccacacgccgcacgacgctgccttcttcctgtcccgccctatgtatgcacaccagatt
ctgtccaagtacgacgagctgaaaaaggctgagaaaggcaaccgacagcagcagaaggtc
cacaagtacattgctgcatgcgagcaggtgatggcgcctgtgcacgaggccgttgtctcc
ctgcacctgcccaaggtttgggatgatttgcggccgcagttttacgccacattctggtcg
ctgaccatgtacgacctggctgtgccgcactctgcctacgaccgagaggtcaacaagctc
aaaatgcagatcaaggccatcgacgagaacacagagatgccactgaacaaaaagaagaag
gagaaggagcggtgcacagctctgcaggacaaactgctggaggaagagaagaagcagctg
gagcatgtgcagagggtactgcaccgtctcaagctagagaaggacaactggttgcttgcc
aaatcaaccaagaacgagaccatcaccaaattcctgcagctctgcctcttcccacgctgc
gtcttctcagccatcgatgctgtctactgcgcccgctttgtcgagcttgtgcaccagcag
aagacacccaacttctgcaccctgctctgctacgaccgggtgttctcagacataatctac
acagtggcaagctgtacagagaacgagtctcgtcgctatggccgattcctgtgctgcatg
ctggagacagtgacacgatggcacagcgataaagccatctatgagaaggagtgtggcaat
taccctgggttccttactattttccgagccagtggcttcgatggaggaaacaaggctgat
cagctagactacgagaacttcagacacgttgttcacaaatggcattataagcttactaaa
gcctccgtgcattgcctggagaccggcgagtacacgcacattcgcaacatcctgatcgtg
ctgaccaagatcctgccctactaccccaaggtgttgaacctgggccaggcgctggagtgc
cgtgtgcacaagatctgccaggaagagaaggagaagaggcccgacctctatgcgttagcc
atgggctactctggccagttgaaaagcaggaaagtgcatatggttcccgagaacgagttc
caccacaaggagccggtgagcagtaccaaccccggtggcctgcagaacggccctggcaac
tccggcaagccagccacctctgcccccgctgcatccaccatcaagagcgaggacggcgcc
gccgaggacacggacaaatcgaaggacaaatcacaggtggcacagaaaactgccagcaaa
accccaaccatggtgaacaaagcaagcagcagcaatggcagcagcacgcctaacagcaca
aaagggagccgagagaaggaggacaaagagaagagtgggaaggagaagaaggagaaaaag
gagaagaacccggcgagcactccagagaccaaggcaggagggaaggagaaacagcagaag
gaggacagggctggcaaagacgagaaggccgccgacggcaaagagaagacgcccaagggt
gacaaagaaaagaggaaggacgacaagaaggacgagaagggcaagggcgatgggaagggt
gccgacaaagagccatccaaggagcgagacgtggccaaggagggcaagctcaaggaaagt
ggcaagggagagaagaatgccgcagccacctccctcaaatccccagttcccagatcagaa
ggagcagagtctgagcgggaacaaaaaagacgaaagctcgacacccactctccaccatcg
cactcctctgcggttaaggacggtctcaacgactttaaggaatcgacctccaaggttttg
cccccttttaccatttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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