KEGG   Elizabethkingia anophelis JM-87: BBD30_08555
Entry
BBD30_08555       CDS       T04743                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
een  Elizabethkingia anophelis JM-87
Pathway
een03410  Base excision repair
een03430  Mismatch repair
een03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:een00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BBD30_08555
   03430 Mismatch repair
    BBD30_08555
   03440 Homologous recombination
    BBD30_08555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:een03400]
    BBD30_08555
DNA repair and recombination proteins [BR:een03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BBD30_08555
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BBD30_08555
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BBD30_08555
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 DSPc SIS_2 Myotub-related
Other DBs
NCBI-ProteinID: AQW94250
UniProt: A0A085CN56
Position
complement(1866470..1868179)
AA seq 569 aa
MMQRWIYKPTPSEDVIDSISSSLGFGYLASKILVMRGIDSYQKAREFFKPKASDIHNPFL
MADMQKAVERIATAIENGEKILVFGDYDVDGTTAVALMYLYLSKICDKKYLDFYIPDRNL
EGYGVSTEGIDYAKENDFSLIIALDCGIKSADKVDYANSLGIDFIICDHHLPGDEIPKAA
AVLDPKRKDCEYPYKDLSGCGVGYKLCQALNTIYKISDHELQDLTDLLAISIAADIVPIT
GENRVFAKMGLNKLRKTKRQGLKILIPYEKLQNFTISNIVFEIAPKINAAGRISHGKAAV
ELMIAENAKQAHLIADQIVNLNDERKELDSNMTQQAIDQVIETKQEETFSTIVYQSGWNK
GVIGIVASRLIELYYKPTLVFTDGTNGEMVASARSVADFDLHHALDACSDLFLKFGGHRA
AAGLSMEKKHFEAFKTKFEDTVRNSIKEHQKTPSIEIDAEISLNDLTNDFFQFHRWLAPF
GPENMKPVLVIKNARVSGHVRKIGKQSSHLKFNIIQDSSRRGIECLAFKMGEHASDFRTK
TFDIAFTIEENHWKDNLTYYLNVRDVIFH
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgatgcaacgatggatctacaaaccgacaccttccgaagacgtaatagatagtatcagc
tcttcgctgggctttggttatttagcatccaaaattctggttatgcgtggaatagattcc
taccagaaagccagagaattctttaagcccaaagcttctgatatccataatccttttctg
atggcagatatgcaaaaggctgtagagagaattgctacagctatcgaaaacggagaaaaa
atactagtttttggggattatgatgtagacggaacaacagctgttgcactaatgtacctt
taccttagcaaaatctgtgacaagaaatatttagatttttatattcctgacagaaatctg
gaaggctatggtgtttccaccgaaggcattgactacgcaaaggaaaatgacttttcatta
atcatcgcattagactgtggaataaagtctgccgacaaagttgactatgctaatagttta
ggaatagactttattatctgtgatcatcaccttcccggtgacgagattccgaaagcagct
gctgtccttgaccctaaacgaaaagattgtgaatacccttataaagatcttagtggatgt
ggcgttggttataaactatgccaggcactgaatacaatttacaaaatttcggatcacgaa
ttacaagatcttactgatcttttggcgataagtattgccgcagatattgtccctataaca
ggtgaaaacagagtttttgccaaaatgggactcaataaattacgtaaaacaaaaagacag
ggattaaagattttaattccttatgaaaagcttcaaaattttacaatttcaaatattgtt
tttgaaattgctcctaaaataaatgctgccggcagaatttctcacggaaaggctgctgtg
gaactaatgattgcagaaaatgcaaaacaggcgcacctcatcgctgatcagattgttaat
ctaaacgatgaaagaaaagagctggacagtaatatgactcagcaggcaatagatcaggtt
atcgaaacaaaacaggaagaaacattcagtacaattgtttaccaatccggatggaataag
ggtgtaatcggtattgtagcctcaagactaattgaattatattataaaccgactctggta
tttacagatggtacaaatggtgaaatggtagcttcagcacgatctgttgcagattttgac
cttcatcatgcattagatgcttgttcagatttatttttaaaatttggaggacaccgcgca
gctgcaggattatccatggagaaaaagcattttgaagcatttaagacaaaattcgaagat
accgtacgaaactctataaaagaacatcagaaaaccccaagtattgagattgatgctgaa
atttctctgaatgacttaactaatgattttttccagtttcatagatggttggctcctttt
ggacctgaaaatatgaaaccagtactggttattaaaaatgcaagagttagcgggcatgta
aggaaaattggaaaacaaagttcccatctgaagtttaatatcatacaggattcttccaga
agagggattgaatgtctggcatttaaaatgggggaacatgccagtgatttcagaaccaaa
acttttgatattgcttttaccattgaagaaaaccactggaaagataatcttacttactat
ctgaatgtaagagatgtgatttttcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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