KEGG   Eikenella exigua: EZJ17_04985
Entry
EZJ17_04985       CDS       T06211                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
eex  Eikenella exigua
Pathway
eex03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    EZJ17_04985 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eex03400]
    EZJ17_04985 (ruvB)
Enzymes [BR:eex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EZJ17_04985 (ruvB)
DNA repair and recombination proteins [BR:eex03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     EZJ17_04985 (ruvB)
    RecFOR pathway proteins
     EZJ17_04985 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Rad17 AAA_22 AAA_14 Mg_chelatase AAA_18 AAA_3 AAA_16 AAA_2 nSTAND3 TsaE AAA_17 RNA_helicase NTPase_1 AAA_33 DUF815 AAA_24 AAA_28 ABC_tran Cytidylate_kin Bac_DnaA AAA_19 NACHT NB-ARC
Other DBs
NCBI-ProteinID: QED92040
Position
complement(949664..950695)
AA seq 343 aa
MLHTDSLTAAEPERLITARQISSQEEQLERALRPKTLADYIGQAKTKEQLGIFIQAAKKR
GEALDHTLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF
IDEIHRLSPVVEEILYPALEDYQLDIMIGEGPAARSVKIDLPPFTLVGATTRAGMLTNPL
RDRFGIVSRLEFYSSADLATIVSRSAGLLQMSLDDTGAFEIARRSRGTPRIANRLLRRVR
DYAEVKSNGRVDAALADAALQMLDVDNEGLDMMDRKFLEAVLHKFAGGPVGLDNIAAAIG
ESPDTIEDIIEPYLIQQGFLQRTPRGRVATERSYSHFGLPFKP
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgctccacaccgattccctcaccgccgccgaacccgaacgcctcatcaccgcccgccag
atttccagccaggaagagcagctcgaacgcgccctgcgccccaaaaccctcgccgactac
attggccaggccaaaaccaaagagcagctcggcatcttcatccaagccgccaaaaagcgc
ggcgaagccctcgaccacaccctcctgttcggcccgcctggcctgggtaaaaccaccctc
gcccacatcatcgccaaagagctcggcgtcaacctgcgccaaaccagcggccccgtgctc
gaacgcgccggcgacctcgccgccctgctcaccaacctcgagccgcacgacgtgctcttt
atcgacgaaatccaccgcctcagccccgtggtggaagaaatcctctaccccgccctcgaa
gactaccagctcgacatcatgatcggcgaaggccccgctgcccgcagcgtgaaaattgac
ctgccccccttcacactcgttggtgccaccacccgtgccggtatgctcaccaatcccctg
cgcgaccgcttcggcatcgtctcccgcctcgagttctacagtagcgccgaccttgccacc
atcgtttcccgttccgccggcctgctgcaaatgagcctcgacgacaccggcgccttcgaa
atcgcccgtcgcagccgcggcaccccgcgcattgccaaccgcctactgcgccgcgtgcgc
gactacgctgaagtgaaaagcaacggccgcgtggatgccgccctggccgatgccgccttg
caaatgctcgatgtggacaacgaaggcctcgacatgatggatcgcaaatttctcgaagcc
gtgctgcataaatttgccggcggccccgtcggcctggacaacatcgccgccgccatcggc
gaaagccccgacaccatcgaagacataatcgagccatatctcattcagcaaggcttcctc
cagcgcaccccgcgcggccgcgtggccaccgaacgcagctacagccacttcggcctgccg
tttaagccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (29)   
   Pfam (29)   
All databases (37)   

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