KEGG T06211: EZJ17

Eikenella exigua: EZJ17_09495

Entry

EZJ17_09495       CDS       T06211

Symbol

topA

Name

(GenBank) type I DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

eex Eikenella exigua

Brite

KEGG Orthology (KO) [BR:eex00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eex03032]
    EZJ17_09495 (topA)
   03400 DNA repair and recombination proteins [BR:eex03400]
    EZJ17_09495 (topA)
Enzymes [BR:eex01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     EZJ17_09495 (topA)
DNA replication proteins [BR:eex03032]
Prokaryotic type
  DNA Topoisomerases
   EZJ17_09495 (topA)
DNA repair and recombination proteins [BR:eex03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EZJ17_09495 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim Zn-ribbon_8 PADR1_Zn_ribbon

Other DBs

NCBI-ProteinID:

QED92808

Position

complement(1867211..1869511)

AA seq 766 aa
MSKNLLIVESPNKIKSIKKYLGSDFEVLASFGHVRDLVPKNGAVDPEHDFTMKYEVPAKS
KKYIDAIVAAAKEANTLYLATDPDREGEAISWHIYEILKSKRGIKNLEERTLRVVFHEVT
KKGVQEALKQPRKLDMGLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRL
ICERENEIRAFETQEYWSVHLDSHKGRQKFAAKLTQWQGSKLEQFSLPNEAAQAAVLAAM
QGKPARVLDVVKKKATRKPAAPYTTSTMQQDAVRKLGFTTDRTMRTAQQLFEGVDVGQGS
VGLITYMRTDSVTLSQDAIAEIRHYIDNKIGADFLPKSPRMYRTKSKNAQEAHEAIRPTS
VYRTPESVKPFLSADQFKLYQMIWQRTMACQMVEAKFDATTVDIGVGEGVFRATGQVLVF
AGFLSVYQEGHDDDDEDEDNKKLPELAVGDALPVDKLYGEQHFTQPPPRFNEATLVKALE
EFGIGRPSTYASIIKTLKDREYVTIDQRRFLPTDTGEIVNKFLTEHFTQYVDYDFTAKLE
DQLDDIASGKRQWIPVMDKFWKGFHKQIEEKAGIERAKITTEELDETCPKCGQHKLQIKF
GKRGRFIACSGYPDCDYTRNLNETADEAAKAAEEPTIVEGRECPKCGGQLVYKKGRFGKF
IGCANYPKCKHIEPLEKPKDTGVACPKCGKGSLIERKSRYGKLFYSCNTYPDCDYATWNP
PVAEECPKCHWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPALKG

NT seq 2301 nt +upstreamnt +downstreamnt
atgtcgaaaaacctgctgattgtggaatctcccaacaaaatcaaatctattaaaaaatac
ctgggcagcgattttgaagtattggcctccttcggccatgtacgcgatttggtgccgaaa
aacggcgccgtcgatcccgagcacgatttcaccatgaaatacgaagtgccggccaagagc
aaaaagtatatcgatgccatcgtggcagccgccaaagaagccaataccctctatctggcc
accgacccggaccgcgaaggtgaagccatttcctggcatatctacgaaatcctcaaatcc
aaacgcggcatcaaaaatctggaagagcgcaccctgcgcgtggtgttccacgaagtcacc
aaaaaaggtgtgcaggaagccctcaagcagccgcgcaagctcgatatgggcttggtggac
gcgcaacaggcacgccgtgccttggattacctggtcggcttcaacctctccccgctgttg
tggaaaaaaatccggcgcggcctgagcgccggccgcgtgcaaagccccgccctgcgcctg
atttgcgaacgcgaaaacgaaatccgcgcctttgaaacgcaggaatactggagcgtgcac
ctcgatagccacaaaggccgccaaaaatttgccgccaagctcacccaatggcagggcagc
aaactggagcagttctccctgcccaatgaagccgctcaggccgccgtgttggccgccatg
cagggcaaacccgcgcgagtgctcgatgtggtgaagaaaaaagccacccgcaagccagcc
gcgccctacactacctccaccatgcagcaagacgccgtacgcaagctcggcttcaccacc
gaccgcaccatgcgcaccgcccagcagctgtttgaaggcgtggacgtcggccaaggctcg
gtcggcctgattacttatatgcgtaccgacagcgtaaccctgtcgcaagacgcgatagcc
gaaatccgccactacatcgacaacaaaatcggcgccgatttcctacccaaatcgccgcgc
atgtaccgcaccaaatccaaaaacgcccaagaggcgcacgaagccatccgccccacttcg
gtgtaccgcacgcccgaaagcgtgaagcccttcctttccgccgaccaattcaagctctac
caaatgatttggcagcgcaccatggcctgccagatggtggaggccaaattcgacgccacc
accgtagacatcggtgtgggcgaaggcgtgttccgcgccaccggccaagtgctcgtattt
gccggcttcctgagtgtgtatcaggaaggccacgatgacgacgacgaggatgaagacaac
aaaaaactgcccgaattggccgtgggcgacgccctgcctgtagacaaactctacggcgag
cagcacttcacccagccgccgccccgcttcaacgaagccacgctggtgaaggccttggag
gagttcggcatcggccgcccctccacctatgccagcatcatcaaaaccctgaaagaccgt
gaatacgtaaccatcgaccagcgccgcttcctgcccaccgacaccggcgaaatcgtgaac
aagttcctcaccgaacactttacccaatacgtggactacgatttcaccgccaagctcgaa
gaccagctcgacgacattgccagcggcaagcggcagtggattcccgtgatggacaaattc
tggaaaggcttccacaaacagattgaggaaaaagccggcatcgagcgcgccaaaatcacc
accgaagagctggacgaaacctgccccaaatgcggccaacacaagctgcaaatcaaattc
ggcaaacgcggccgcttcatcgcctgctccggctaccccgattgcgactacacccgcaat
ctcaacgaaaccgccgacgaagctgccaaagccgctgaagagcccaccatcgtagaaggg
cgagaatgtcctaaatgcggcggtcagcttgtgtataaaaaaggccgtttcggaaaattc
atcggctgtgccaactaccccaagtgcaaacacatcgaacccttggaaaaacccaaagac
accggcgtggcctgccccaaatgcggcaaaggcagcctgatcgagcgcaaatcgcgctac
ggcaagctgttctacagctgcaacacctaccccgactgcgactacgccacctggaacccg
cccgtggccgaagaatgcccgaaatgccactggccagtgctcaccatcaaaaccaccaaa
cgctggggtgtggaaaaagtctgcccacagaaagagtgcggctggaaagagcaaatcgaa
ccgcccgccctgaaaggctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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