KEGG   Enterococcus faecalis D32: EFD32_0176
Entry
EFD32_0176        CDS       T02172                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
efd  Enterococcus faecalis D32
Pathway
efd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:efd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EFD32_0176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:efd03021]
    EFD32_0176
   03400 DNA repair and recombination proteins [BR:efd03400]
    EFD32_0176
Enzymes [BR:efd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EFD32_0176
Transcription machinery [BR:efd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     EFD32_0176
DNA repair and recombination proteins [BR:efd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      EFD32_0176
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L TUTase HHH_5
Other DBs
NCBI-ProteinID: AFO43068
Position
181374..182312
AA seq 312 aa
MIEFEKPRIEKIDENRDYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITNIQIDGVL
HEFSTIPGVREDVTQIILNIKGLALKLYAEEEKTLEIDITGPATVTAGDIIVDSDVEILN
KDLVICSVAEGATFHARLTVKPGRGYVQADENKKEDMPIGVLPVDSIYTPVRRVNYQVEN
TRVGRRDDFDKLTMEIWTDGSIIPQEALSLAAKIMTEHLDIFVNLTDEAKNAEIMVEKEE
TQKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKSEPEMIKVRNLGRKSLEEVKLK
LHDLGLGLRKDD
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgaatttgaaaaaccaagaatcgaaaaaattgatgaaaatagagattatggtaag
ttcgtcgttgaaccattagaacgcggttacggaactactttaggtaactctctacgtcgt
attttattgtcttctttaccaggagctgcaattacgaatattcaaatcgatggtgtttta
cacgaattctcaaccattccaggtgtacgagaagacgtaacacaaattattttgaatatt
aaaggcttagcattgaaattatatgctgaagaagagaaaacccttgagatcgatattaca
ggacccgctaccgtgactgccggcgatattatcgtggacagtgatgttgagatcctaaat
aaagatttagttatctgtagtgttgctgaaggagctactttccatgctcgcttaacagtg
aaacctggtcgtggctatgttcaagcagacgaaaacaaaaaagaagatatgccaatcggt
gtacttccagttgattccatctacacacccgttcgtcgtgttaactaccaagtagaaaat
acacgtgttggtcgtcgtgatgatttcgacaaattaacaatggaaatatggacagatggt
tcaatcattcctcaagaagcactaagtttagctgcgaaaatcatgactgagcatttagat
atctttgtaaaccttactgacgaagcgaaaaacgctgaaatcatggtggaaaaagaagaa
actcaaaaagagaaaatgctagaaatgacgattgaagaacttgatttatcagttcgttca
tataactgtttaaaacgtgcaggcattaatactgtacaagaacttacaaacaaatctgaa
ccagaaatgatcaaagtacgtaatttaggtcgtaaatctcttgaagaagtaaaacttaaa
ttgcatgatctaggattaggattacgtaaggacgattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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