KEGG   Escherichia fergusonii: EFER_1002
Entry
EFER_1002         CDS       T00811                                 
Symbol
rumB
Name
(GenBank) 23S rRNA m(5)U747 methyltransferase
  KO
K03212  23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
Organism
efe  Escherichia fergusonii
Brite
KEGG Orthology (KO) [BR:efe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:efe03009]
    EFER_1002 (rumB)
Enzymes [BR:efe01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     EFER_1002 (rumB)
Ribosome biogenesis [BR:efe03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EFER_1002 (rumB)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_25 Cons_hypoth95 Methyltransf_15 Methyltransf_12 Methyltransf_11 Methyltransf_32
Other DBs
NCBI-ProteinID: CAQ88534
UniProt: B7LN23
Position
1030870..1031997
AA seq 375 aa
MQCALYDAGRCRSCQWITQLIPEQLSAKTADLKNLLADFSVEEWCESVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPSSFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQEQLPQLKVITANIQPIHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPVVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATTQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMTKDIRELSGYRIERVQLFDMF
PHTAHYEVLTLLVKQ
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagctg
attccagagcaactctccgctaaaaccgccgatcttaaaaatctgctcgccgacttttcg
gttgaggaatggtgcgagtcggtgtcaggcccggagcaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgcgacggcaca
ccagaagacctttgcgattgtccgctttatccctcctcatttgcgcccgtttttgcggcg
ttaaaaccgtttatcgcccgtgcggggttaacaccctacaacgtggcgcgtaagcgtggc
gaactgaaatacattctgctgactgaaagccaaagtgatggcggcatgatgctgcgcttt
gtactgcgttccgaaaccaagctggcacaactgcgtaaggcgctgccgtggttacaggaa
caactgccgcagctgaaagtcattaccgccaatattcagccgatacatatggcgattatg
gaaggggagacagagatctacctgaccgaacaacaggcactggcggagcgttttaatgat
gtgccgctgtggatccgtccacaaagtttcttccagactaatccggtagtcgccagccag
ctgtacgctactgcgcgcgactgggtacgacagttgccggttaaacatatgtgggatctg
ttctgtggcgtgggcggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcgccagaggccattgcctgtgcgaagcagtcagctgctgaactgggctta
acgcgtttgcaatttcaggcgctggactccactcagtttgccaccacacagggagaggtg
ccggagctggtgctggttaacccgccgcgccgcggcattggtaaaccgctgtgtgattat
ctttcaacgatggcaccgcgttttatcatctactccagctgtaacgcccaaacgatgacc
aaagatatccgcgaactgtcaggttatcgtattgaacgggtacagctttttgatatgttc
ccgcacaccgcgcactatgaagtgctgacactgttggtgaagcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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