KEGG   Escherichia fergusonii: EFER_3179
Entry
EFER_3179         CDS       T00811                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
efe  Escherichia fergusonii
Pathway
efe02020  Two-component system
efe02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:efe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EFER_3179 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EFER_3179 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:efe03021]
    EFER_3179 (rpoN)
Transcription machinery [BR:efe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EFER_3179 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: CAQ90672
UniProt: B7LR69
Position
3264141..3265574
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHEEVDTQQ
PQDSEALDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDETGYLTVSLEDILESMGDEEIDIEEIEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLDEARLIISDHLDLLANHDFRSLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QQYAAMCNGARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAEAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggcttagccaacaactggcgatgacgcctcagttacaa
caggcgattcgtctgttgcaattgtcgacgctggaactccagcaagaacttcagcaggcg
ctggaaagtaaccccctgctcgagcaaaccgaccttcacgaagaagttgatactcagcag
ccccaggatagcgaagcactggacaccgctgacgcactcgaacaaaaagagatgccagag
gagctgccactcgacgccagttgggatgaaatctataccgcaggtacgccatcgggcacc
agtggtgattacatcgatgacgaactcccggtctatcagggtgagacaacccagacattg
caagattacctgatgtggcaggttgagctgacgcccttttccgataccgatcgagctatt
gcgacttcaatcgttgatgctgttgatgaaaccggctatctcactgtctcgctggaagat
attctcgaaagcatgggtgatgaagagatcgacatcgaagagatcgaagccgttctcaaa
cgaatccaacgttttgatcctgtcggtgtcgcagcaaaagatctgcgtgactgtttgctg
atccaactttcccagtttgacaaatcaaccccctggctggatgaagcccgattaatcatc
agcgatcacctggatctactggcaaatcatgactttcgcagcttgatgcgtgttacgcgg
ctgaaagaagatgtgctgaaagaagcggttaatttgatccagtctctggatccccgtccc
ggtcagtcgatccagacgggagagccagaatatgtgatcccggatgtgctggtgcgtaaa
cataacggtcactggacagtggagctcaacagcgacagtattcctcgtctgcaaattaac
caacaatatgcagcaatgtgtaatggtgcacgtaatgacgccgacagccaatttattcgc
agcaacttacaggatgcgaaatggcttataaagagtctggaaagccgtaacgacacatta
ctgcgcgtcagccgctgcatcgtagaacaacagcaagccttctttgagcaaggcgaagaa
tttatgaaaccgatggtgctggcagatatcgccgaggccgtcgaaatgcacgaatcgacg
atttcccgtgtgaccacgcagaaatatctgcacagtccacgaggcatttttgaactgaag
tatttcttttccagccatgttaataccgaaggcggaggcgaagcctcatcaacggcgatt
cgggcgctggtgaagaaactgatagcggcagaaaatcccgcgaaacctctgagtgacagc
aagttagcaactatgctttctgaacagggtatcatggtggcgcgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtcaaatcagcgtaaacaactggtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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