KEGG   Candidatus Endolissoclinum faulkneri L5: P856_688
Entry
P856_688          CDS       T04221                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
efk  Candidatus Endolissoclinum faulkneri L5
Brite
KEGG Orthology (KO) [BR:efk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:efk03016]
    P856_688 (rnd)
Enzymes [BR:efk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     P856_688 (rnd)
Transfer RNA biogenesis [BR:efk03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    P856_688 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AHC73895
UniProt: V9TX33
Position
1194627..1195787
AA seq 386 aa
MNLINDTQTLSAVCNRIAEEPYVAIDTEFLRNKTYYSKLCLVQLAGEHDVVAVDILAPDI
NPMPLFDLMANHNVLKVFHAARQDTEIFVHMTNQVPVPMFDTQVAGMVCGLGNAVSYDRM
VRVITGVILDKSYRFTDWSQRPLSTQQIDYALGDVIHLRPCYECLSNRLIKTNRLKWLEE
EMAILTDISTYIIKPEECWKRIKTRSNKQNFLVVLRALAAWRELKAQKSDIPRNYILKDD
ALVYIASQLPTSSTELSCSQFFNRKSLNNRMIKEILEVIKIALESPKNTWPKAIPNQGKA
QERQPIVEMLQVLLKLQCKKYNVAPKLVANANDLDAIAAEDTADLPAMKGWRREIFGKVA
LAVKQGKLAFAFDTINNRLTLIKVPK
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaaccttatcaacgatacgcaaaccttatcagcagtttgcaaccgcattgcagaagag
ccttatgttgcaatagatacagaattcctcagaaacaaaacatattattctaaactttgt
ttagttcaacttgctggcgaacatgatgtcgttgcagtcgatatcctggcacctgatata
aacccaatgccactttttgatctgatggctaatcataatgtgcttaaagtttttcacgcg
gctcgtcaagatactgagatattcgtacatatgactaatcaggtcccagtgccaatgttc
gatactcaggttgctggaatggtgtgtggccttggtaacgctgtgagttacgatcgcatg
gtgcgagtaataactggagtaatcttagacaaatcctatcgtttcactgactggagtcaa
aggccattgtcaacccaacaaatcgattatgcgctaggcgatgtaatccatctccgtcct
tgctacgaatgcttatcgaatcggctaattaaaactaatcgcttaaaatggcttgaagaa
gagatggcaatactaactgatatttcgacttacattataaaaccagaagagtgctggaaa
agaataaaaacccgctccaataaacaaaactttcttgttgtactacgcgccttagctgca
tggcgagaattgaaagctcaaaaaagcgatattcctcggaattatatcctgaaagacgat
gcattagtatacattgcttcgcaattaccaacttctagcaccgaattgtcgtgctctcaa
tttttcaatcgcaaatccctcaataacagaatgattaaggaaatactggaggttataaaa
atagccctagaatcaccgaagaacacctggcctaaggcaattcctaatcaaggtaaagca
caagagcgtcaaccaatagttgaaatgttacaagtcctactaaaattacagtgcaaaaag
tacaacgtagccccaaagctagtagctaacgctaacgatctagatgctatagcggctgaa
gatactgcagatttacctgctatgaaaggctggcgtagagaaatattcggtaaagtagcc
ttggcagttaagcaaggcaagctcgcatttgccttcgacacaataaataatcgactgaca
ctgatcaaagttcctaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system