KEGG   Entomoplasma freundtii: EFREU_v1c00710
Entry
EFREU_v1c00710    CDS       T05222                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
efr  Entomoplasma freundtii
Brite
KEGG Orthology (KO) [BR:efr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:efr03032]
    EFREU_v1c00710 (topA)
   03400 DNA repair and recombination proteins [BR:efr03400]
    EFREU_v1c00710 (topA)
Enzymes [BR:efr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     EFREU_v1c00710 (topA)
DNA replication proteins [BR:efr03032]
 Prokaryotic type
  DNA Topoisomerases
   EFREU_v1c00710 (topA)
DNA repair and recombination proteins [BR:efr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EFREU_v1c00710 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim Fe_dep_repress PADR1_Zn_ribbon Toprim_4
Other DBs
NCBI-ProteinID: ATZ16098
UniProt: A0A2K8NSG7
Position
complement(91613..93574)
AA seq 653 aa
MAKVLVLLESPSKTKKIQHFLTEGFPENEFTVLASAGHINKIPDRGENGLGIDLETMTPN
FVVERGKSKNITEIKKAAKQADMIVLASDPDREGEAIAWHLANLLLDFNKPTKRATFNEI
TSSAVIEAFKNLTEIDEDLVKAQLSRQMLDKIIGYLVSKALQKNTGLMSAGRVQTPALYL
LIARDRLIKAFKEISYHKIKVVEPKRHLNLLLTKDKDQVLVNTEKTYYINDQQAETILNN
LGDIYQCIDYKATPYETRSFKPYSTAGLLQDGFSKLHLSAAQITVAAQKLYEAGLITYIR
TDSTRYSETFIQEAKTYIETHFKPELYAGLAIQKKDKNAQEAHESIRPTNLAETPEKVMD
QLDDEIQKRIYALIWWNTLKSLMHGPRGINHRWTLLNEGYEFKQSWQEVHDDGYQNLVHQ
KSDEDIELDDNEEEIGQKLRQPKVDLPLEKDFTTTISKDFVQNESAKTMPPKMYNQASLI
KELKALGIGRPSTYSPILTKLKEREYVIYHKGKAIEMTEKGYVAEDYLYKGFEEFFNLSY
TASMEEKLDEIANGNFDNVKWLKEIYGHLNNKTKEEVAKAQTSDLLCPKCHDGKLVFIKS
RYGRGRGCSLFSTNGCSYREYEQPDGSWLEYIAQPKEKKAKKPRKAPTKKNKK
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggccaaagttttagtgctcttagaatcaccatcaaaaaccaaaaaaattcagcatttt
ttgaccgaaggtttcccagaaaatgagttcacagttttagcaagtgcaggtcacattaat
aaaattccagaccgtggtgaaaatggtcttggtattgatttagaaacaatgaccccaaat
tttgtcgttgaacggggaaaaagcaaaaatattactgaaataaaaaaagcagctaaacaa
gccgatatgattgttctagcttccgatccagatcgcgaaggggaagcaattgcttggcat
ctagctaacttacttttggattttaataaaccaacaaagagagctacttttaacgaaatc
acgagttccgcagtaattgaagcctttaaaaacttaacagaaattgatgaagatttagtt
aaagcgcaattatcacgtcaaatgcttgacaaaataattggctacttagtctcaaaagcc
cttcaaaaaaatactggtttaatgagtgctggtcgagtgcaaacacctgccctttacctt
ttaattgctcgcgaccgtttgattaaggcctttaaagaaatttcctaccataaaattaaa
gtggttgaaccaaaacgccatttaaatttattactaactaaagataaagaccaagtcttg
gtcaatactgaaaaaacttattatattaatgatcaacaagccgaaactattcttaataat
ttaggtgatatttaccaatgtattgattacaaagccactccatatgaaacaagaagtttt
aaaccctattcaacggctggtctattacaagatggtttttcaaaactacatcttagtgcc
gctcaaatcaccgtcgcagcacaaaaattatacgaagctggtttgataacttatatccgt
accgattcaacacgttattcagaaacttttattcaagaagccaaaacctatattgaaact
cattttaaacctgagctttatgctggtttagctatacaaaaaaaagataaaaacgcgcag
gaagctcacgaatcaattcgccccactaatttagcagaaacacccgaaaaagtgatggac
caattggatgacgaaattcaaaaaagaatttatgccttaatttgatgaaatacacttaaa
tcattgatgcatggaccacgtggaattaaccaccgctgaacccttcttaatgaaggttat
gaatttaaacaatcatggcaagaggtgcatgatgatggttaccaaaatttagttcaccaa
aaatctgacgaagatatcgaacttgatgataacgaagaagaaattggccaaaaactccgt
caacctaaagttgatttacctttggaaaaggactttacaacaacaatttcaaaagatttt
gtgcaaaacgaatcagctaaaacaatgccgccaaaaatgtataatcaagcaagtttaatt
aaggaattaaaagccctaggtattggtaggccttcaacttatagcccgattttgacgaaa
cttaaagaacgcgaatacgttatttaccataaaggtaaggctatcgaaatgacagaaaag
ggatatgttgcggaagattatctttataaaggctttgaagaattctttaaccttagttat
actgcttccatggaagaaaaactagacgaaatcgccaatggtaattttgacaatgttaaa
tggttaaaagaaatctacggacacttaaataacaaaaccaaagaggaagtcgcaaaagct
caaaccagtgacttgctttgcccaaaatgtcacgatggtaaactagtttttattaaatca
cgatatggtcgtggacgtgggtgctcattattctcaacaaacggttgttcctatcgtgaa
tatgaacaaccagatggtagttgactagaatatattgctcagccgaaggaaaaaaaagca
aaaaaaccaagaaaagcgccaactaaaaaaaataaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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