KEGG T02399: EFS1

Enterococcus faecalis Symbioflor 1: EFS1_1406

Entry

EFS1_1406         CDS       T02399

Symbol

topA

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

efs Enterococcus faecalis Symbioflor 1

Brite

KEGG Orthology (KO) [BR:efs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:efs03032]
    EFS1_1406 (topA)
   03400 DNA repair and recombination proteins [BR:efs03400]
    EFS1_1406 (topA)
Enzymes [BR:efs01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     EFS1_1406 (topA)
DNA replication proteins [BR:efs03032]
Prokaryotic type
  DNA Topoisomerases
   EFS1_1406 (topA)
DNA repair and recombination proteins [BR:efs03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EFS1_1406 (topA)

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 DUF2996 Auto_anti-p27

Other DBs

NCBI-ProteinID:

CCO72484

Position

complement(1457058..1459136)

AA seq 692 aa
MAYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDIENNYEPHYISIRG
KGDVIKSLKAAAKKAEKVYLAADPDREGEAIAWHLAYLLGLDLKDKNRVVFNEITKEAVK
AAFKEPRTINVDLVDAQQARRILDRLVGYSISPILWRKVKKGLSAGRVQSVALKMIIDRE
NEIREFKPEEYWSIDGNFQKGRKKFKANFWGVDGKKKKLPNAEAVKEITSRIDGKDYDVT
KVEKKERKRNPALPFTTSSLQQEAARKLNFRTRKTMMVAQQLYEGIALGKQGTVGLITYM
RTDSTRIADSAKAEAAEFIEKTYGDEFSAHGGRKAKNTQGAQDAHEAVRPSSVLRTPDEM
KKYLDKDQLKLYTLIWSRFVASQMTPAILDTMKVTLQQNGVTFIANGSKVKFKGFMQVYV
EGRDDGKEDKENILPELVEGDVVKSVDIEPKQHFTQPPARFSEATLIRTLEENGVGRPST
YAPTLETIQRRYYVKLTNKRFEPTELGEIVNSLVSEFFPQIVDTHFTATMETDLDKVGEG
QEKWVEVVDRFYKPFEKELTNAEEKIEKIQIKDEPAGFDCELCGHPMVIKLGRYGKFYAC
SNFPDCRNTKAIVKEIGVTCPVCHEGQVIERKSKKNRIFYGCSRYPECDFTSWDKPVGRP
CPKCGQYLVEKKVKGGKQVVCINGDYEENVQK

NT seq 2079 nt +upstreamnt +downstreamnt
atggcctataagtatctcgtgattgtagaatcacctgccaaagccaaaacaattgaaaaa
tatctaggaagaaactacaaggtggttgccagtgttggtcacattcgcgatttaccaaaa
agtaaaatggggattgatattgaaaataattatgaacctcattatatttcgattcgcgga
aaaggcgatgtcatcaaaagtttaaaagcggctgcaaaaaaagctgaaaaagtctatctc
gcagccgatccggaccgagaaggtgaagcaattgcttggcatttagcttatcttcttggc
cttgatttaaaagataaaaaccgtgtggtattcaatgagatcactaaagaagcggtaaaa
gcggcatttaaagaacctagaaccatcaacgttgatttagttgatgcacaacaagcacgg
cgcattttagaccgtttagttggatactcgattagtcctattttatggcgtaaagtcaaa
aaaggtttgagtgctggtcgtgtgcaatctgttgctttaaaaatgattattgatcgagaa
aatgaaattcgagaatttaaacctgaagaatattggagcattgatgggaatttccaaaaa
ggtcgcaagaaattcaaagcaaatttctggggcgtagatggtaaaaagaaaaaattacca
aatgcagaagcggtgaaagaaatcacttctcgaattgacggtaaagattacgatgttaca
aaagttgagaaaaaagaacggaaacgtaatcctgcattaccttttacaaccagtagttta
caacaagaagcggcacgtaaattaaatttccgtacccgtaaaaccatgatggttgcgcaa
caattgtatgagggaattgctttagggaaacaaggcactgtggggctgattacctacatg
cgtacagactcaaccagaattgccgattccgccaaagcagaagctgctgaattcattgaa
aagacctacggagatgagttctcagcacatggcggccgcaaagcaaaaaatacgcaaggt
gcacaagatgcccatgaagcggttcgtccgtcaagcgttttaagaacacctgatgaaatg
aagaagtatttagataaagatcaattaaaattatatactcttatttggtcgcgctttgtt
gctagtcaaatgacaccagcgattttagataccatgaaggtcacgcttcaacaaaacggc
gtaacgtttattgccaatggctccaaagtgaaatttaaagggtttatgcaagtatatgtt
gaaggacgcgatgatggtaaagaagacaaggaaaatattttacctgaattagtggaaggt
gacgttgttaaatcggtcgatatcgaaccgaaacaacactttactcaaccaccggctcgt
tttagtgaagccacgttaatccggactttagaagaaaatggtgtgggccgaccatcaacg
tatgcgccaacattagaaaccattcaacggcgttattacgtgaagctaaccaataaacgg
tttgaaccaacggaattaggtgaaattgtgaattctctagtttcagagtttttcccacaa
attgtcgatacacattttacagcgacaatggaaacggacctagataaagtcggtgaaggc
caagaaaaatgggttgaagttgtcgatcgcttctacaagcccttcgaaaaagaattaaca
aatgccgaagaaaagattgaaaaaatccaaattaaagatgaaccagcaggttttgactgt
gaactatgtggacatccaatggtgattaaactgggtcgctacggaaaattttatgcatgt
agtaatttcccagattgtcggaatacaaaagcgatcgttaaagaaattggcgtgacgtgt
cctgtgtgtcacgaaggacaagttatcgaacgcaaatcaaagaaaaatcgaattttctat
ggctgtagtcggtacccagagtgtgacttcacttcttgggacaaaccagtaggccgacca
tgtccaaaatgtgggcaatatttagtagagaaaaaagttaaaggcggcaaacaagtcgtt
tgtatcaatggcgattatgaagaaaacgtccaaaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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