KEGG   Enterococcus faecium T110: M395_07760
Entry
M395_07760        CDS       T03257                                 
Name
(GenBank) ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
eft  Enterococcus faecium T110
Pathway
eft03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eft00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    M395_07760
  09124 Replication and repair
   03420 Nucleotide excision repair
    M395_07760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eft03021]
    M395_07760
   03400 DNA repair and recombination proteins [BR:eft03400]
    M395_07760
Enzymes [BR:eft01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     M395_07760
Transcription machinery [BR:eft03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     M395_07760
DNA repair and recombination proteins [BR:eft03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     M395_07760
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII Helicase_C IstB_IS21 PhoH AAA_30
Other DBs
NCBI-ProteinID: AII39326
Position
1586078..1588453
AA seq 791 aa
MIKQSKISVRHLVEFILRRGSIDNRKKSSHTALEGARIHRKLQKDAGEDYEKEVFLKTTV
PLDEYHLIVEGRADGIFKRDGIYYIDEIKTSEPRFEDLEPEQVELFFHQARVYAYIYSQE
HDLQEINLQLTYFQTVEEVITRKVEHQTREQLETFFKKLTEDYKEWLVFQENWRTVRNAS
LMALKFPHDEYRKGQRELAVAAYKTIRTKQKLFVEAPTGTGKTISTLFPALKAVGEEEGE
KIFYLTAKTITRQVAEDAMTALKDTGAEVKSVTLTAKDKICFLDETTCNPDQCPYANGYY
NRINEGLWDLLNHENQITREVIETYARKHTLCPFELSLDVSIWCDVIIGDYNYLFDPTVY
LRRFFEDEKNEDYLFLIDEAHNLVNRSREMYSAELSYEKTKRSKEAIPKEFKKLHRRFNK
LLKEFDSIREIAKEDHWDYHHQKAPAESLVKAGYQLSEKIKEWLAEFPEHPSQEQLLPYY
FDLLHFLKVSEFYDDHYETTVEKTYRDLIVKEFCIDPSLFLEQSLDKGRSSILFSASFSP
LSYYQETLGGQKSLAYKLPSPFPEGNQQVFIANYLETTYRKREQSLAELVETIHAFADGK
VGNYFVFFPSYQYLDLAAEAFKQQYPDSNVLIQETDMNEEERERFLAKFQADPDETLIGF
CVLGGIFSEGIDLRGNRLIGSMIVGVGLPQMNHEQELIKSYYDEKEHLGFAYAYQLPGMN
KVLQAGGRVIRGMADQGIVVLADQRFARFSYRRLFPQHWQTAREVRSVGELEEGIQRFWS
SKEAVNQKNEG
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgatcaaacagtcaaaaatatctgtgcggcacttagtagaatttattttgcgacgtgga
agtatcgacaatcgtaaaaaaagtagccatactgcattagaaggagcaagaatccaccgc
aagctccaaaaagatgcgggagaagactatgaaaaagaagtctttttaaaaacaacagtt
ccattagatgaatatcacctgatcgttgaaggccgtgcagatggtattttcaaaagagac
ggtatttattatatagatgaaatcaaaacatccgaaccacgatttgaagatttagaacca
gaacaagtggaacttttctttcatcaagcaagggtatacgcctatatctatagtcaagag
catgatttacaagaaataaatctgcaattgacttactttcagacggtagaagaagtgatt
acgagaaaggtcgaacatcagacaagagagcagttagaaactttttttaaaaaactgact
gaagattataaagaatggcttgtttttcaagaaaactggcgcactgtacgcaatgcctct
ttgatggctttgaaattcccccatgatgagtataggaaaggccagcgtgaactagcggta
gctgcttataaaacgatccgtacgaaacagaaattgtttgtagaagcacctaccggaaca
ggaaaaacaatctctacgttattccccgctttgaaagctgtaggggaagaagagggagaa
aagatcttttatctaacggccaaaacaataactagacaagtagctgaagatgccatgaca
gctttaaaagatactggagctgaagtaaaaagtgtcactttgacggctaaagataagatc
tgctttttagatgagacgacctgtaatccagatcagtgtccgtatgccaatggttattac
aatcgtatcaatgaagggttatgggatctgttgaatcatgagaatcagattactcgagaa
gtcatcgaaacttatgcaagaaagcatacactttgtcctttcgaactatcattagatgtc
agtatctggtgcgacgtgatcattggggattacaattatctgtttgatcccactgtttat
ttaagacgtttttttgaagatgaaaaaaacgaggattatctgtttttgattgatgaggca
cataatttggttaatcgttcccgagagatgtattcggcagaactatcttatgaaaaaacg
aaacgaagtaaggaagctataccaaaggaatttaaaaaactccatcgtcgtttcaacaaa
ctattgaaagaatttgattcgatccgagaaattgcaaaagaagatcattgggattatcat
catcaaaaagcaccagctgaatctttagtaaaggcaggttatcaattaagcgaaaaaatc
aaagaatggctagcagaatttcctgagcatccatcacaagaacaattgcttccttattat
tttgatttgcttcattttttgaaggtcagtgaattttatgatgatcactatgaaacaacg
gtcgaaaaaacgtatcgcgatctgatagtaaaagagttttgtattgatccaagcttgttt
cttgagcagtcgttggataaaggaagaagcagtatccttttttctgcgagtttttcaccc
ctatcttattatcaggaaacactgggcggacaaaaaagtctagcttacaaactgccgagt
cctttcccagaaggaaaccagcaagttttcatcgcaaattacctagagacgacttatcga
aaaagggaacaaagtctggcagaattagtagagacgatccatgcttttgctgatggaaag
gtcggaaattatttcgttttctttccttcttatcaatatttagaccttgcggcggaagca
ttcaaacagcaatatcctgacagcaatgtgctgatccaagaaacggacatgaatgaggaa
gaacgcgaacgatttttagcaaaattccaagcagatcccgatgaaacattgataggattt
tgtgtacttggtgggattttttcagaaggaatcgatttgagagggaaccgattgatcggc
agtatgatcgtaggtgtaggcttgccgcagatgaatcatgagcaggaactgatcaaatca
tattatgatgagaaggaacaccttggatttgcttacgcttatcagcttcctggaatgaac
aaagtcttgcaagctggtggtcgagtgattcgtggcatggcggatcaaggaatcgtggta
ttggcagatcaacgatttgctcgtttttcttatcgacgtttattcccacaacattggcaa
acagcaagagaagtacgaagtgttggagaattggaagaaggaatacagcgtttttggtca
tccaaagaagcagtaaatcaaaaaaacgagggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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