KEGG   Enterococcus faecium T110: M395_12305
Entry
M395_12305        CDS       T03257                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
eft  Enterococcus faecium T110
Pathway
eft03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:eft00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    M395_12305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eft03021]
    M395_12305
   03400 DNA repair and recombination proteins [BR:eft03400]
    M395_12305
Enzymes [BR:eft01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     M395_12305
Transcription machinery [BR:eft03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     M395_12305
DNA repair and recombination proteins [BR:eft03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      M395_12305
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF719
Other DBs
NCBI-ProteinID: AII40001
Position
complement(2506962..2507267)
AA seq 101 aa
MMLKPSIDSLLDRVNSKYSLVILASKRAHELDASAQPTLDSFDSVKSVGQALEEIDAGNV
VNDPHPELKRERLKMEEEERQAQKEREQHELESRIREEQKM
NT seq 306 nt   +upstreamnt  +downstreamnt
atgatgttaaaaccttcaattgactcactattagatcgtgtaaattcaaaatattctcta
gtaattttagcaagcaaacgcgcacatgagctggatgcaagtgcacaacctacactagat
tcttttgattcagtaaaaagcgttggtcaagctttagaagaaatcgatgcagggaatgta
gtcaatgatcctcatcctgaattaaaacgtgaacgtttgaagatggaagaagaggaacgt
caagctcaaaaagagcgtgaacaacacgaattggaatcacgtatccgcgaagagcaaaaa
atgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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