KEGG   Enterococcus gallinarum: AL523_00485
Entry
AL523_00485       CDS       T04148                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ega  Enterococcus gallinarum
Pathway
ega02020  Two-component system
ega02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ega00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AL523_00485 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AL523_00485 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ega03021]
    AL523_00485 (rpoN)
Transcription machinery [BR:ega03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AL523_00485 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_3 HTH_23 HTH_17 HTH_21 HTH_IclR Sigma70_r4 HTH_Tnp_ISL3 HTH_28 Sigma70_r4_2 HTH_38 LacI
Other DBs
NCBI-ProteinID: AMG48357
UniProt: A0A0X8PLJ9
Position
complement(116108..117424)
AA seq 438 aa
MKFQQQFSQQQKQTQKLAMTQKLQQSIQVLQFSADELLSFIDNQALENPLIDLGEYDSPI
TPSKSNGSSEQLMDYLSQIPDQHTSLFEYLIDQVHLNYRDTFLRTIVLFLVEYIDLNGFL
TIDLEEAGKLVGGTPIQMLDALTLIQQLDPAGVGARDLRECLMLQTERDDYAPPMAYLIL
EEFFTEMAERKWDKISKALQIPLTEIQKVFDYVQTLTPTPGAAFGSTDGLYIVPDLRVTV
EKGQPIVKSNKRALPEVRFQQQYFDQLKQSGDPEVLSYLDNKAQEFEWLKKTLLQRGDTI
YRVGVQIVARQKEFFTQPDRPLKPLVLREVAEELGIHESTVSRAVNGKYLETSFGVFELK
LFFGQKVSTQESGDDLTTASIKQQLKALIDEENKNKPLSDQKLTDALKAQGIDISRRTVA
KYREAMNIPGSSKRKRFE
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgaaatttcaacagcaattttcacaacaacaaaaacagacgcaaaagcttgctatgacg
cagaaattacagcaatcgatccaagtgttgcaattttctgcagacgaattattgtccttc
atagataaccaagcattagaaaatccattgattgatttgggggaatatgattcgcccatc
acaccaagcaaaagcaatggctcatcagaacaattgatggattatttaagccagatccct
gaccagcatacgtctttattcgaatacctcattgatcaagtgcatttaaactaccgagat
accttcttgcggacgatcgttttatttttagtcgagtacattgatttaaacggctttttg
acgattgatctggaagaagctggaaaacttgttggtgggaccccaatccaaatgctcgat
gccttgaccttgatccagcagctagatccagcaggcgtcggtgctcgtgatctaagagag
tgtttgatgctgcaaacggaaagagatgactatgcgccgccaatggcttatctcatttta
gaagaattcttcacggaaatggcagagcgcaagtgggacaaaatcagcaaagcgctgcag
attccattaactgagatccaaaaggtctttgattatgttcaaacattgacccccacacca
ggggctgcgtttgggtcaaccgatgggctttacatcgttcctgacctgcgggtgacggtt
gaaaaaggacagccgatcgtgaaatcaaacaaacgcgccttaccagaggttcgctttcag
cagcaatattttgatcaattgaagcaaagcggtgatccagaggtcttaagttatttagac
aataaagcccaagagttcgagtggctgaaaaagaccttgctgcaacgaggggataccatc
tatcgtgtcggggtgcagatcgttgcacggcaaaaggagtttttcactcaaccagatcgc
ccattaaagccattggttttaagagaagttgccgaagaattagggattcatgaatcaacg
gtcagccgagcggtcaacgggaaatacttggaaacttcctttggggtgtttgaattaaaa
ctattttttggacagaaagtttcgacacaagaaagcggtgatgacctgacgacggcatcg
atcaaacagcagctaaaggcactgatcgatgaagaaaacaaaaataaaccattgtcagat
cagaagttgacagatgccctcaaagcccagggcatcgatatttccagacgaacggtggca
aagtatcgtgaagctatgaatatcccaggttcttccaagcggaaacgattcgagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system