KEGG   Duffyella gerundensis: EM595_0264
Entry
EM595_0264        CDS       T04258                                 
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
  KO
K08316  16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Organism
ege  Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:ege00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ege03009]
    EM595_0264 (rsmD)
Enzymes [BR:ege01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     EM595_0264 (rsmD)
Ribosome biogenesis [BR:ege03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    EM595_0264 (rsmD)
SSDB
Motif
Pfam: Cons_hypoth95 MTS Methyltransf_25 RrnaAD RsmJ Methyltransf_16 Methyltransf_31 Methyltransf_PK StiP N6-adenineMlase
Other DBs
NCBI-ProteinID: CUU22501
UniProt: A0A0U5L028
Position
1:complement(284680..285279)
AA seq 199 aa
MIKKTRSTGQIRIIAGQWRGRKLPVPDSAGLRPTTDRVRETLFNWLSADIQQARCLDCFA
GSGALGLEALSRYAASVTLLELEKPVAQQLQKNLSALNAQNGRVVQANALSWLAQAGEPH
DVVFIDPPFRKGLLEQTLSLLEQHGWLAENALIYVESEVENGMPPVPVNWNLHREKIAGQ
VAYRLYARQASRQEKTHVA
NT seq 600 nt   +upstreamnt  +downstreamnt
atgattaagaaaacacgcagcaccggacaaattcgtattattgccggacagtggcgcggc
cgtaagttaccggtgcctgacagcgccggtctgcgccctaccaccgatcgcgtccgcgaa
accttgtttaactggctgtcagcggatattcagcaggcgcgctgtctggattgcttcgct
ggcagcggtgcgctggggctggaagcgctgtcacgctatgccgcgtcggtcacgctgctg
gaactggagaagccggttgctcagcagctgcaaaaaaacctcagcgcgctgaatgcccag
aatggccgcgtggtgcaggccaatgcgctgagctggctggcacaggccggcgaaccgcat
gatgtggtgtttatcgatccgccttttcgcaaaggcctgctggaacagacgctcagcctg
ctggagcagcatggttggctggcagagaacgcgctgatttacgtggaaagtgaagtggaa
aatggcatgccgcccgtgccggtaaactggaatctgcaccgcgagaaaattgccggtcag
gttgcgtatcgtctttatgctcgtcaggcatcacgtcaggagaagacgcatgtggcttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (24)   

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