KEGG   Duffyella gerundensis: EM595_1130
Entry
EM595_1130        CDS       T04258                                 
Name
(GenBank) DNA-3-methyladenine glycosidase II
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
ege  Duffyella gerundensis
Pathway
ege03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ege00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EM595_1130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ege03000]
    EM595_1130
   03400 DNA repair and recombination proteins [BR:ege03400]
    EM595_1130
Enzymes [BR:ege01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     EM595_1130
Transcription factors [BR:ege03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    EM595_1130
DNA repair and recombination proteins [BR:ege03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     EM595_1130
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC HhH-GPD RecR_HhH HTH_28 HTH_23 Sigma70_r4
Other DBs
NCBI-ProteinID: CUU23365
UniProt: A0A0U5L2S9
Position
1:complement(1232374..1233918)
AA seq 514 aa
MSENSECEDETPAMFSVRHYRRKENGMIDSDIAWQALTSRDTRFDGVFFVGVTSTGIYCR
PICPVKAPLQKNCLFFANAEAAEKAKFRPCLRCRPELAPGNAPVDNSHRVADLLVQRLEQ
GAIDETESLEEIAAQFDLSLRQLRRIVHKELGVSPLELRQTRRLLLAKQLLTETALPVTD
IAYASGFASLRRFNDVFQRCYRMSPSQLRKTVVDEHAPPLNSTSTLELSYRPPFDWQIML
DFLRGHAVLHIEHVDDISYSRTVALGHHQGWIRVTHHQKKPVLLVEFTHSLLPVLPALLR
RLRNLFDLNAQPACIDEALRQDPLLAKSVADFPGLRIPGAFDGFELTVRAILGQQITVKA
ATTLGGRFANAFGDKIETPFPTLSRLPPSATRIHHATLDEIASLGIISARAKCILALAEA
CSSGALILDACPWPQKIIAQLKALPGIGDWTAQYVAMRALRWPDAFPAGDIVIRNNLGGM
TAKQAEQRSAVWRPWRSYAVMHIWRSLGKNGIRK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtccgaaaacagcgagtgcgaggatgaaaccccagctatgtttagtgtccggcactac
cgccgcaaggagaacggcatgatcgattctgatatcgcctggcaggcgcttacttctcgc
gacacgcgctttgacggtgtgttttttgtcggcgtcacctcgaccgggatttactgccgt
cccatctgcccggtaaaagcgccgctacaaaaaaactgcctgttttttgccaacgctgaa
gcggccgagaaggcgaaatttcgcccctgcctgcgctgtcgtcctgaactggcgccggga
aatgcgccggtcgataacagccatcgggtggccgatctgctggtgcagcgactcgaacaa
ggcgccattgatgagaccgaaagcctggaagagattgccgcgcagtttgatctcagcctg
cgccagctacgccgtattgttcataaagagctgggcgtttcgccgcttgaactgcgtcag
acgcgtcgtctgctgctggctaaacagctgctgaccgagaccgcattgccggtgacggat
attgcctatgccagcggtttcgccagcctgcgtcgttttaacgacgtttttcagcgctgt
tatcgcatgtcccccagccagctgcgcaaaacagtggtggatgagcacgcaccgccgcta
aacagtacctcgacgctggagctaagctatcgcccgccgtttgactggcagattatgctc
gactttctgcggggccatgcggtgctgcatatcgaacatgttgatgatatcagctatagc
cgcacggtggcgctgggtcatcatcagggctggattcgggttacccatcatcagaaaaag
ccggtgctgctggttgagtttacccattcgctgctgccggtgctgcctgccctgctgcgc
cgcctgcgtaatcttttcgatctgaatgcgcagcccgcctgtatcgatgaagcgctgcgt
caggatccgctgctggctaaaagcgtggctgattttccgggcctgcgcattcccggcgcg
tttgatggttttgaactgacggtgcgcgccatccttggtcagcaaattaccgtgaaagcg
gcgaccacgctgggcggccgttttgccaatgcctttggcgataagatcgagacgccgttt
ccgacgcttagccgactgccccccagcgccacgcgcattcatcatgccacgctggatgag
atcgcgtcgttgggcattatcagcgcccgggcaaaatgtattctcgcgctggccgaggcg
tgcagtagcggcgcgctgatcctcgatgcctgcccatggccgcaaaaaattatcgcccag
cttaaagcgctgccgggcatcggtgactggacggcgcagtatgttgccatgcgcgcgctg
cgctggccggacgcttttccggcgggggatatcgtgattcgtaataatctcggtggcatg
accgcgaagcaggcagagcagcgttcggcagtttggcgcccctggcgcagctacgccgta
atgcacatctggcgcagcctggggaaaaacggcatcaggaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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