KEGG   Duffyella gerundensis: EM595_1538
Entry
EM595_1538        CDS       T04258                                 
Symbol
oppD2
Name
(GenBank) putative ABC transport system, ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
ege  Duffyella gerundensis
Pathway
ege02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ege00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EM595_1538 (oppD2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ege02000]
    EM595_1538 (oppD2)
Transporters [BR:ege02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    EM595_1538 (oppD2)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N oligo_HPY AAA_22 AAA_16 AAA_29 AAA_33 nSTAND1 DUF87 RsgA_GTPase TniB AAA_23
Other DBs
NCBI-ProteinID: CUU23772
UniProt: A0A0U5LN55
Position
1:1648363..1649223
AA seq 286 aa
MTSSIPAMNSPLLDVQDLHVSFVSGGQLTQAVRGVSFQLGREKLAIVGESGSGKSTVGRA
LLQLHPAKARITAQAMRFGEFDLLNASAAEMRGIRGKRISMIMQDPKYSLNPVLCVGEQI
AEAWRIHHKSSAAAAKARVIEMLDVVRIREPQRVYNLYPHEISGGQGQRIMIAMMLITDP
ELVIADEPTSALDVSVRMQVLELLDDLVKSRGLGLIFISHDLNLVRHFCDRVLVMYAGRV
VESIAAADLDRAQHPYTQGLLNALPDMNHRRPRLPVLQRQASWLTE
NT seq 861 nt   +upstreamnt  +downstreamnt
gtgacatcctcgatccccgcaatgaatagcccgctgctcgatgtgcaggatctgcatgtc
agctttgtctccggcggtcagctcacccaggcggtgcgcggcgtctcgtttcagctgggc
cgtgaaaaactggccattgtcggcgagtccggttccggtaaatccaccgtcgggcgcgcg
ctgctacagctgcatccggccaaagcccgcatcacagcgcaggcgatgcgcttcggggag
ttcgatctgctcaacgccagcgcggctgagatgcgcggcattcgcggcaagcgcatttct
atgatcatgcaggacccaaaatactcgctgaatccggtgctctgcgttggcgagcagatc
gccgaagcctggcgcatccaccacaaaagcagcgcggcagcggccaaagcgcgggtgatt
gagatgctcgacgtggtgcgcatccgtgagccgcagcgggtctataacctctatccgcac
gaaatttccggcgggcaggggcagcgcatcatgatcgccatgatgctgatcaccgatcct
gaactggtgatcgccgatgagcccacctcggcgctcgacgtctcggtgcgcatgcaggtg
ctggagctgctggatgacctggtcaaatcacgcggcctggggctgatattcatcagccac
gatctgaatctggtgcggcatttttgcgaccgggtgttggtgatgtacgccgggcgcgtg
gtggaatcgatcgccgccgccgatctcgatcgcgcgcagcatccttacacccagggcctg
cttaatgcactgcccgacatgaaccatcggcgcccgcgtttgccggtgctgcaacgccag
gcgagctggctgaccgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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