KEGG   Duffyella gerundensis: EM595_1539
Entry
EM595_1539        CDS       T04258                                 
Symbol
oppF1
Name
(GenBank) putative ABC transport system, ATP-binding protein
  KO
K02032  peptide/nickel transport system ATP-binding protein
Organism
ege  Duffyella gerundensis
Pathway
ege02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ege00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EM595_1539 (oppF1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ege02000]
    EM595_1539 (oppF1)
Transporters [BR:ege02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    EM595_1539 (oppF1)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_22 AAA_16 AAA_23 AAA ABC_ATPase AAA_29 AAA_5 AAA_19 AAA_30 MobB DUF3987 Mg_chelatase DO-GTPase2 PRK AAA_28 Pox_A32 NACHT
Other DBs
NCBI-ProteinID: CUU23773
UniProt: A0A0U5E976
Position
1:1649234..1650001
AA seq 255 aa
MAEPMIAVRNLNLSFGEDAQASQVLFDVNFEVNQGEIFGLVGESGSGKTTVLKCLAGLFT
HWQGELAINGAPLAHEIGRERCRLVQMVFQDPYGSLHPRHTIGDILEEPLHIHQIGQQDK
KVCEMLEKVGLSRAYRSRYPHQLSGGQRQRVAIARALILQPRVLLLDEPTSALDVSVQAE
ILNLLSDLQQQEQLTWLMVTHDLGVIAHLCHRVGVMQYGRLLETLDVEDLLHDRARESYT
QTLVSASRDYPRAAV
NT seq 768 nt   +upstreamnt  +downstreamnt
atggctgaaccgatgatcgcggtgcgtaacctgaacctcagctttggcgaagatgcccag
gcgagtcaggtgctgtttgatgtgaacttcgaggtgaatcagggcgagatttttggcctg
gtgggcgaatccggatcgggcaaaaccacggtgctgaagtgcctggccgggctgtttacc
cactggcagggcgagctggccattaacggtgcgccgctggcccatgagataggccgtgag
cgctgtcggctggtacagatggtgtttcaggacccttacggctcgctgcatccgcgtcat
accattggcgatattcttgaggagccgctgcatatccatcagatcggtcagcaggataaa
aaggtgtgcgagatgctggagaaagtggggctgagccgcgcctatcgcagccgctatccg
catcagctctccggcggtcagcggcaacgcgtcgccatcgcccgcgcgctgattttgcag
ccgcgtgtgctgttgctggatgagccgacctcggcgctcgacgtctcggtccaggcggaa
atcctcaacctgctcagcgatctgcagcagcaggagcagctcacctggctgatggtgacc
cacgatttaggcgttattgcgcatctctgccatcgcgtcggcgtcatgcagtatggccgc
ctgctggagacgctggatgtggaggatctgctgcacgatcgtgcccgcgagtcctatacg
caaacgctggtcagcgccagccgcgactaccctcgcgccgcggtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system