KEGG   Duffyella gerundensis: EM595_1956
Entry
EM595_1956        CDS       T04258                                 
Symbol
yciL
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ege  Duffyella gerundensis
Brite
KEGG Orthology (KO) [BR:ege00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ege03009]
    EM595_1956 (yciL)
Enzymes [BR:ege01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     EM595_1956 (yciL)
Ribosome biogenesis [BR:ege03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EM595_1956 (yciL)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: CUU24190
UniProt: A0A0U5L189
Position
1:complement(2086365..2087243)
AA seq 292 aa
MSEKLQKVLARAGHGSRREIETMISAGRVSVDGKIATLGDRVEVDKSMKIRIDGHIVAIT
ESATEVCRVLAYYKPEGELCTRNDPEGRPTVFDRLPRLRGARWVAVGRLDVNTCGLLLFT
TDGELANRLMHPSREVEREYAVRVFGQVDDDKIRQLSRGVQLEDGPAAFKTIKFAGGEGI
NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELELPPINYL
RELVDLPAETVTKVAVEKDRRRTKANQIRRAVKRHSNVSSGSRRTNSNSKRG
NT seq 879 nt   +upstreamnt  +downstreamnt
atgagcgaaaagttacaaaaagttttagcgcgcgcgggccatggctcacgacgcgaaatt
gaaacgatgatcagcgccggacgcgtcagcgtcgatggcaaaattgccaccctcggcgat
cgcgttgaagtcgacaaatcgatgaaaatccgtattgatgggcacattgttgccatcacc
gaatcggccacggaagtgtgccgtgtgctcgcttactataagccggaaggcgagctgtgc
acgcgcaacgatcccgaaggtcgcccaaccgtatttgatcgcctgccacgcctgcgcggc
gcgcggtgggtagcggtgggtcgtctcgatgttaacacctgtggtctgttgctgttcacc
accgatggtgagctggccaatcgcctgatgcacccaagtcgtgaagttgagcgtgaatat
gcggtacgcgtttttggccaggttgacgatgataaaattcgccagctgagccgcggtgtg
caactggaagatggtccggcagcatttaaaaccatcaagtttgccggcggtgaaggcatc
aaccagtggtacaacgtcacattgaccgaaggccgtaaccgtgaagtgcgccgcctgtgg
gaagccgtgggtgtacaggttagccgtctgattcgtgtgcgttatggcgatattccgttg
ccaaaaggtctgccacgcggtggctggaccgaactggagctgccgccaattaactatttg
cgcgagctggtggatctgcctgcggaaacggtcaccaaggtggcggtagaaaaagatcgc
cgtcgcaccaaggcgaaccagattcgccgggcggtgaaacgtcacagcaatgtcagcagc
ggttcgcgtcgcactaacagcaacagcaaacgcggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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