KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_00401
Entry
EGR_00401         CDS       T05553                                 
Name
(RefSeq) Cullin-4A
  KO
K10609  cullin 4
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03420  Nucleotide excision repair
egl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EGR_00401
  09124 Replication and repair
   03420 Nucleotide excision repair
    EGR_00401
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egl04121]
    EGR_00401
   03400 DNA repair and recombination proteins [BR:egl03400]
    EGR_00401
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:egl04147]
    EGR_00401
Ubiquitin system [BR:egl04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     EGR_00401
DNA repair and recombination proteins [BR:egl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      EGR_00401
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      EGR_00401
Exosome [BR:egl04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   EGR_00401
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 UvrD-helicase EutC
Other DBs
NCBI-GeneID: 36336116
NCBI-ProteinID: XP_024356328
Position
Unknown
AA seq 824 aa
MYAKGKEAVTLVLSASTRERNYWHALEARPALWRSGKLCRHGHFLVRNNTNKRSNQGFAC
SEYTSPSGVDAELSEAKIGSEYILHWAAWLAVLIDFDFTNMPIYHSMSDRTQPAKHFSFN
VFDSYVGNERTTTELAFERDHAKLREAVFAVIHNNRIDDTMEQLYRRVENVNDDSMIVKL
YETLKSVFTLYADELTWILKMLLSVGTPIAKKCIFLCMDQQLPLINSNFLQLWDLAVVLF
RNTIIMHGSVQPRILKSLLDLIRQERCGASIEKGLLRSVVRMYSDLNLYHSHFEEPFIRQ
SRLFYDEEGKTLSQKMTISDYLIHVNRRIDEEEERIKMFLAGLTRAPLMSVLNSELISKR
LSFLLSSLSSLILEHKFKELHLLYYLLSRVDNGVSNLRTEFKSIVMRVGCDIVDNPENSV
EKDREMIQRLLEWKDTLTDSIREGFSDDSSFSRTVQDAFEDFINRRQNKPAECLAKYLDN
QLRSSNRAQSEYEFDRLVDKILVIFRCIDGKDVFRAFYSSQLARRLLLGRSASVDAEKAV
LSRLKQECGINYTRKMELMFQDIQLSLELSRGFRAHQTEVYAIDFTVNVLAPASWPEMPT
LAANYPSEMLAIREDFEKFYVARHRGRRLTYIPSFGTCVVRAQFPSCTKELQVSEIQALV
LLQFNGPADEPVSYTSIAEATGIEKSHLDRALLSFAASKTQRVLISLPLTSELTEKNQFY
FNKKFTHHLTRIRFNQLQLKESAKEQKATENRIFADRVNHIDCCIVRIMKSRKTLDHNSL
ISETFQLLKFPLTQTDVKKRIEFLIGKDYLRRDPANSAIYHYVA
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgtacgcaaaagggaaagaagctgtaacacttgttttgtcggcctccacaagggaacgg
aattattggcatgccctggaagccagaccggcgctgtggagatcaggtaagctttgcagg
catggacatttccttgttcgtaataatacaaacaagcgcagcaatcagggctttgcttgt
tcagagtacacctccccctcgggggtagatgcagaactgagcgaagccaaaatcggaagt
gagtacattcttcactgggctgcctggctcgccgttctcatcgatttcgatttcacaaac
atgcctatctatcactcaatgagcgataggacacaaccagctaaacatttctcatttaat
gtctttgatagttatgtaggtaatgaaagaacaactactgaactggcatttgaaagagac
cacgccaaacttcgtgaagctgtatttgcagttattcataacaatagaattgatgatact
atggaacaactatataggcgtgtcgaaaatgtaaacgatgattcgatgatagtgaaatta
tacgaaactctcaaatcagtcttcacactctatgcggatgagctaacatggatcttaaaa
atgcttctctcggttgggacacctattgccaaaaaatgcatcttcttgtgcatggatcaa
caattgccattaataaattcaaatttcctacaactttgggatttagcggtggttttgttc
cgtaatactattataatgcatggttctgtgcagcctagaatcctcaaaagtctacttgat
ctgatccgccaagagcgatgtggagcgagcatagaaaagggtctgcttcgatcggtagtt
cgaatgtactcagacctgaatctttatcattcacattttgaggaaccttttatccgtcaa
agtcgactattttacgacgaagagggtaaaactctgagccaaaaaatgaccatatctgat
taccttatccacgtgaataggcgcatcgacgaagaggaagagcggataaagatgtttctc
gctggtcttactcgagctccactcatgtccgttctaaattctgagctcatatccaagcgt
ctttcctttctcctatcatcgttatcgagtctgattctcgagcataagtttaaggagctt
catctgctctattatctcctctcgagagtcgataatggtgttagcaacttgcgaacggag
tttaagtccatcgtcatgcgtgttggttgtgatatagttgacaatccagaaaactctgtc
gaaaaggatagggagatgattcaacgtctactggagtggaaagacacgttaacggactcc
atcagagagggtttttctgatgattcttccttcagccgaacggtgcaagatgcctttgag
gatttcataaatcgccgacaaaacaagccggctgaatgcctcgccaagtatctcgacaat
caattacggtctagcaacagggctcaatcggaatatgaatttgatcgacttgtagataag
atcttagtcatctttcgctgtattgatggaaaagatgtgtttcgagctttctactccagc
cagttggccaggcgtttgcttctgggcaggagtgcctctgtggacgcagagaaagcggtt
ctctcaaggctgaaacaagaatgtggtattaactacacacgaaaaatggagctcatgttt
caggatatccaactgagcctcgagctgagcagaggttttcgagcacatcagacagaagtc
tatgcaatcgatttcactgttaatgtccttgcccccgcctcttggccggagatgcccaca
ctcgcggccaactacccttctgagatgcttgccattcgagaagatttcgagaagttttac
gtcgctcgacatcgcggaagaagactcacctatattccctcttttggtacttgtgtcgtt
agggctcagtttccctcctgcacgaaggagctgcaggtctctgagatccaggcgctggtt
ctgctccaattcaacggtccggcagacgagcctgtctcctacacttccattgccgaggca
acaggcatcgaaaaatcccatctagaccgtgctcttctctcattcgccgcaagcaaaacc
cagcgtgttctcatatcacttcctctgacctcggaattaacagagaaaaaccagttctac
ttcaataagaagttcacccaccacctcacacgcattagatttaatcagctccagctcaag
gaatcggccaaagagcaaaaggctaccgagaatcgcattttcgccgatcgcgttaatcac
atcgactgctgcatcgtgcgtatcatgaagtctcgcaaaactcttgatcacaatagcctc
atttccgagacctttcagcttctaaaatttccactcacgcaaacagatgtaaagaagaga
atcgagtttcttatcggtaaggactacttgagaagagatcccgccaacagcgccatttac
cactacgtggcttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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