KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_01578
Entry
EGR_01578         CDS       T05553                                 
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03013  Nucleocytoplasmic transport
egl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EGR_01578
  09122 Translation
   03013 Nucleocytoplasmic transport
    EGR_01578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egl03019]
    EGR_01578
   03041 Spliceosome [BR:egl03041]
    EGR_01578
Messenger RNA biogenesis [BR:egl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     EGR_01578
Spliceosome [BR:egl03041]
 Complex C
  Other components
   EJC/TREX
    EGR_01578
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    EGR_01578
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 36337293
NCBI-ProteinID: XP_024354692
Position
Unknown
AA seq 1563 aa
MNTLSLLSTGSKFVSSCLKEWSRFGRANFIQQSKDDVDVCTQNLCDLFIKIISGEGRVDI
LNKLISELAKVFNDDDFSSKLADILWLLDVAMTDANDAQARDRFFQILSVCKGSTDSALL
MERLSDETLEQISLISSHMQTRTRYVRIKTRLFYKQQKFNLLREESEGYAKLIVDLSNTP
MGSAEVCITHVRSLIGYFDLDPNRVLDIILDVFEIRRDAFSLFIELLTLYQPDKADLTHI
LGHKFHFYQEREGTTPESLHRLAALLISSGLVDVDILFAHLQPPDATIHSGRLKSIRDAK
SWRPVMHPTGSAIHGSLDNFIATGGLAPTVSGTGTGGSGSLLGDPSRPLGSGNDTDHWNG
LNGGGSRRGGGALDTSDDSDDKKDAWLPENDVEIEDSAEFQFVNNQKLDLCTALANSGDW
KAAQKVIDRFPGHWVGSYAPLNKAICNLVHFLIDQLYESKSTLPPSMLKRRKKPTPPELF
LNQEDAKRLTIQQATTFGNLGRYILPIVGYLGPFVSSDVTLIVKLCRVCSVYVSDLMSKK
AQPDAVYQAIFNMLDEAILPALNMVSANCCLAEEIWKLIRHLPYEHRLVYRLYGQWKHMS
SQGEPALLRKRTTILIRTKALMKRLSKENVKQLGRHLGKLSHSNPGLLFDFMLHNIQMFT
NLITPVVDSLKYVSSLGYDVLAFCLIEALASDKNKTDSLEMGSNLHGQFSFVTHKIFIAL
ATFTGALCKKYQFDLAGILQYVLNQLKAGRSEDLLILQEIIHQMAGLDPYEEMTNEQLEA
ASGGEILLQEGGYYAQIRNARRNANRLKEALIENKVIMPLVFLMAQQRDAILYLDDPERH
VKTAGRLYDQCQGTLVQFITFLSLQLSREEMQAQCFSIDQMMSEYSVPADTAFCLFRNLF
LQKVAHLFEASIEKSGDDDKSVPANNKAAYVKAARTVIVDVAHSIEPLYPPRVWEELGTA
FFATFWCLESGDLVFPSAAYQRQRHILRSQLDAIEQNSDLNSDKKRREKERCQTLMNRLS
KEQDARRVHVDRIRAWLLSERDTWFQTMSATKTDTITQFLQFCVYPRVFYTASDAVYAAQ
FIHVLHQLKAAQFSTLICLDRIFNDITLPVSICTEKEAHRYGRFLCRVFEFVMRWHSSEE
IFNQECGQYPGFVTVFRKGTNANTKADQLQFENYRHVVHKWHYRVTKAAVACLESGNYAQ
IRNALIVLTRILPHYPKIGQFGSAVERRVNKLKEEEKDRRPDLKASFSYFPSCTKNYAGV
LRPLKANWVSEEEFHEVEQKPPTKTQLSSQHIQSSTLSQGSNPALAITEASVIAPPTTTA
VVSTSTAPTSTRVSPPVDSTRTHTVSSSEGVVKPVVATTNSKSTRNPSVSSQKRVASNAS
CEGGNSSSIEHVSGDDLCDTKHRRNPSERSYGVSSSKRPRVSDPQQQQQQMKEDSPTLVS
SKEIRRLQRKRAAAAVLLGNPAGNVAPSDVDGRGNKDSVAYLDLDDTHTSSAAPSSKKSR
KGGPPRLPVSMEKQRMEEEGVDHRHRRSPASGSHRRHRSTRRASGGGSPSTPPTAAQLRH
TRK
NT seq 4692 nt   +upstreamnt  +downstreamnt
atgaacacattatctctcctgagtactggttctaagtttgtttcctcttgcctgaaagaa
tggtctagatttgggcgtgcaaacttcattcaacagtcaaaagatgacgtggacgtttgc
actcagaatctatgtgatttatttatcaagattattagtggtgaggggagagtagacatt
ctaaacaagttgatatctgaattagcaaaggtatttaacgacgatgacttttcatcgaaa
ttggcagacattttgtggcttctggatgttgcaatgaccgatgcaaatgatgctcaagca
agagatcgtttcttccaaatcctctctgtgtgcaagggttcaacggattctgcgctttta
atggaacgactttccgatgaaacacttgaacaaatatccttgattagttcacatatgcaa
actcgaactcgttatgtgcgcataaagactagactcttttacaaacagcagaagttcaat
cttcttcgggaggagagtgaaggctatgctaagctgattgttgatttaagtaacaccccc
atgggttcggcggaagtttgtattactcatgttcggtctctcatcggctattttgatctt
gatcccaaccgcgtgctcgatatcattttggatgtctttgaaattcgtcgagacgcattt
tctctcttcatcgaattgctcactttgtatcagcccgataaagctgacttaactcatatt
ttgggtcacaaatttcacttctatcaggaaagggaaggtaccacaccggagtctctacac
cgtcttgctgcactcctcatttcctccggtttggttgatgttgatattctttttgctcat
ttgcagcccccagacgcgactattcactcaggtcgtctgaagagtattcgtgatgcaaaa
tcttggagaccggtcatgcacccgactggttccgccatacacggcagtttggacaatttt
atagcgaccggtggcctagccccgacagttagtggtaccggcactggtggttcaggaagt
ctgctaggcgatcccagtcgaccgcttggtagtgggaatgacacagatcactggaatggt
ctcaatggtggaggcagcaggcgaggaggtggtgctttagacacaagcgacgactccgac
gacaagaaagatgcctggttacctgaaaatgacgtggaaatcgaagattctgcagagttt
cagtttgttaacaatcagaaattagacctctgcacagctttggctaattctggcgattgg
aaggccgctcaaaaagtcatcgatagatttcctggtcactgggtcggttcctatgctcca
ctcaacaaggctatctgcaatctggttcatttcctgatagatcaactttacgaaagcaaa
tcgactttgcctccatcgatgctgaagagacggaagaaaccaacaccaccagagttgttc
ttgaaccaggaagatgccaaaaggttaaccatacaacaagcaaccacctttggcaacctg
ggacgttatattttaccgattgttggctaccttggtcccttcgtttccagtgacgtaacg
cttatcgttaagctttgtcgtgtttgttccgtctatgtatctgatttgatgagtaaaaag
gctcaaccagatgcagtttaccaggcaatattcaacatgctggacgaggcgattttgccc
gctttaaatatggtgtctgcgaattgttgtcttgctgaggagatatggaagcttattcgt
catttgccttatgaacacaggctggtatatcggctttacggtcaatggaagcacatgagt
agccaaggtgagccggcgcttctacggaaacgcaccactattctcattcgaacaaaggca
ctaatgaagcgcctgagcaaagagaatgtcaagcaactggggcgtcatcttggtaaacta
tctcatagcaatcccggtctgctgttcgattttatgctacataatatacaaatgtttact
aatctcattaccccggtcgttgattcgttgaagtatgtgagcagtctcggttatgatgtc
cttgcattctgtcttatcgaagcactggcgtcggacaaaaataagacggattcattggaa
atgggaagcaatttgcatggtcagttttcttttgtcactcataagatttttatagccctt
gctacctttaccggagcgctgtgtaagaaatatcaatttgacttggcgggtatcctccaa
tacgttttgaatcaacttaaagctgggagaagtgaggatctactcatcctacaggagata
atccaccagatggcgggtttagatccatacgaagagatgaccaacgagcagctagaggcg
gcctcgggtggggagattcttctccaggagggaggctactacgcccaaattcgaaacgca
cgtcgcaacgctaatcgcttgaaggaagctcttatcgagaataaggtcattatgccactc
gtctttctaatggcgcaacagagggatgccattctctacctagatgatccagaacgacac
gtgaaaaccgctggacgtctctacgatcagtgtcaaggaacgttggttcaattcatcacc
ttccttagtcttcaactctcgcgagaagagatgcaggcacaatgtttttctattgatcaa
atgatgagcgagtactctgtccctgcggatacagccttctgcctcttccgaaacctcttt
ctccaaaaagttgcacatttgtttgaagcgtcaattgagaagtccggtgacgacgacaaa
agtgtaccagcaaataataaggctgcttatgtgaaggcagcacgcaccgtcatagtcgac
gtggctcactctattgagccactttacccgccacgagtttgggaggaactgggtacggcg
ttctttgccaccttttggtgtctcgagtcgggcgatctcgttttccccagcgccgcctac
cagcggcaacgccacatcttacgcagccaactcgatgcgatcgagcagaactccgacttg
aattcagataagaagcgtcgtgagaaggagcgctgtcagacgctgatgaatcgtctgtcg
aaggagcaggacgcgcgtagggtgcatgttgaccgcattcgcgcttggttgctgtcggaa
cgagacacctggttccaaacgatgtcggccaccaagacagacacaataactcagttttta
caattctgtgtctatccacgtgtattctacactgccagcgatgctgtctatgctgcccag
ttcatccacgtgctccaccagctgaaagctgcgcaattctccaccttgatttgtctcgac
aggattttcaacgatataacgttgccagtaagcatatgcacggagaaggaggcgcatcgc
tacggtcgatttctctgcagggttttcgaatttgttatgcgatggcactcctcggaggag
atcttcaatcaagaatgtggccagtatcccggctttgtaactgtttttcgcaaaggcacg
aatgcaaacacaaaggcggaccaattgcaattcgagaactaccggcatgtagtgcacaag
tggcactacagagtgaccaaggcggcagttgcgtgtcttgagtcgggtaactacgcacaa
atccgcaatgccctcattgtgctcacgcgcatcttgccgcactacccgaaaattggccaa
ttcggcagcgccgtagaacggagggtcaacaaactcaaggaggaggagaaggataggcga
ccggatctaaaggcaagcttttcttacttcccctcatgtacaaaaaactacgcgggtgtg
ttacgtccattgaaggccaattgggtctcggaagaggagtttcacgaggtggagcagaag
cctcctacgaagacccagttgtcctcccaacacatccagtcgtcaaccttgtcgcagggc
agtaaccctgccttagcaataacagaggcatctgtcatcgccccacctactacgacagct
gtggtcagcacaagcaccgcccctaccagcactcgcgtctctcctcccgtcgactccacg
cgcacccacactgtctcgtcatccgaaggagtcgtgaagccagttgttgcaacaactaat
agcaagtctaccaggaacccgagtgtctcatctcaaaagcgtgttgcatccaacgcatcc
tgtgagggcggaaactccagctcaatagaacacgtttccggtgatgatctttgtgacaca
aaacaccgccgcaacccatctgagaggagctatggcgtgtcttcttcaaaacgccctcgc
gtgtcagatccacagcagcagcaacaacaaatgaaagaagattcgccaactctagtctcc
tcaaaagagatacgtcgccttcagcggaagcgagcagccgccgcagtcctcctcggtaac
ccagcaggcaacgtcgctcccagcgacgttgatggccgcggaaataaggacagcgtcgct
tatttggatctcgacgacacgcatactagcagcgctgcgccatcgtcgaaaaagtccaga
aagggcggaccccctcgcctcccggtgtcgatggagaagcaacggatggaggaggaagga
gtagaccaccggcaccggcgttcccctgcatcaggcagccaccgacgccatagatccact
cgtcgggcctctgggggtggctcaccctctacaccacctacggctgcacagctgcgtcac
acgcggaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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