KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_02554
Entry
EGR_02554         CDS       T05553                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EGR_02554
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:egl03000]
    EGR_02554
   03021 Transcription machinery [BR:egl03021]
    EGR_02554
Transcription factors [BR:egl03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    EGR_02554
Transcription machinery [BR:egl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     EGR_02554
  RNA polymerase III system
    TFIIIB
     EGR_02554
  RNA polymerase I system
    SL1/TIF-1B
     EGR_02554
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 36338269
NCBI-ProteinID: XP_024353618
Position
Unknown
AA seq 289 aa
MHVCQPSKSTGPNLLKMLGKHHCRDPSWTPQPSNVSIGSVLTSNPPGSVEQMQPTPVNQL
VSVVGSYAAPSSAQAHSRPPCTPNTPGTPFHERDGVIPQPQLQNIVCTVNLEIRLDLRRI
AQSARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSENEARLAARKYARIIQK
LGFDARFKGFTIQNMVGSCDVRFHIRLEGLNAAQKKFTTYEPELFPGLVYRMQKPKIVLL
IFVSGKIVLTGAKVRDEIYQAFSNIYPILKNFMKLDSDKSGLHQQAISG
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcatgtctgccaaccgtctaaatctacgggtccaaatcttctcaaaatgcttggcaaa
caccattgccgggatccctcgtggacccctcagccaagcaatgtgagcatcggcagcgtc
ctcaccagcaaccctccgggttccgtcgagcagatgcagccaactcccgtcaaccagctt
gtcagtgttgttggaagctacgctgctccttccagcgctcaggcacacagtaggccgccg
tgtactccaaacactcctggtacaccattccacgaacgcgatggcgtaatacctcagcca
cagctacaaaatatcgtgtgtacagtgaatctcgagataaggttggacttaagacggata
gctcaaagcgcacgtaacgctgagtacaacccgaaacgatttgctgccgtgatcatgcgt
atccgggagccacgaactactgcactcatcttctcctccggcaaaatggtctgcactggt
gccaaaagtgagaatgaggcgcgtcttgctgcgcgcaagtacgcccgaattattcaaaag
ttgggttttgatgctcgattcaaaggtttcacaattcagaacatggtggggtcctgtgac
gtgcggttccatattcgtctggagggtctaaacgctgcacaaaagaaatttaccacgtac
gaacccgagttgtttcccgggcttgtttatcggatgcaaaagcccaagattgtccttctg
attttcgtgtcagggaaaatcgtcttaaccggtgccaaagtgcgagatgagatctatcaa
gccttcagtaatatctatccaatactaaagaactttatgaaattggattcagacaaatcg
ggactgcatcaacaagcaatcagtggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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