KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_05629
Entry
EGR_05629         CDS       T05553                                 
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
  KO
K04556  parkin [EC:2.3.2.31]
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl04120  Ubiquitin mediated proteolysis
egl04137  Mitophagy - animal
egl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    EGR_05629
   04120 Ubiquitin mediated proteolysis
    EGR_05629
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    EGR_05629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:egl04131]
    EGR_05629
   04121 Ubiquitin system [BR:egl04121]
    EGR_05629
   03029 Mitochondrial biogenesis [BR:egl03029]
    EGR_05629
Enzymes [BR:egl01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     EGR_05629
Membrane trafficking [BR:egl04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    EGR_05629
  Aggrephagy
   Other aggrephagy associated proteins
    EGR_05629
  Xenophagy
   Other xenophagy associated proteins
    EGR_05629
Ubiquitin system [BR:egl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    EGR_05629
Mitochondrial biogenesis [BR:egl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    EGR_05629
SSDB
Motif
Pfam: zf-RING_14 IBR ubiquitin
Other DBs
NCBI-GeneID: 36341344
NCBI-ProteinID: XP_024350675
Position
Unknown
AA seq 397 aa
MPVVFRFNDKSVSLHVNEGWSILFLKQLVCSKLDCDPHTHFLAHQGVQLSDWDGVSNFAF
LISDDASIDVLPHSTINNCYVLCYHCDNVTPAVFTTVCDKCASPNFEVLSDIANPEIQAV
SGTCKECNNTSAKVSINCSKDVTHSPTIFLKQVFRNFDHLLCVACCSKASDIVVKFCENR
GHILCLDCFRTYAESYLSDARYVLISDIGYTLPCPLGCPVSYISDTHLFRILGKVFYSRY
KEFAAKLFCYTEGCLSCPNCGTFWERPDDKAQNAWVTCEEPYGCGVEFCSNCRSIVSGEG
NPSRCTCRQGKATTERSLLDQITRCGIFGTWSGVQLDSSDLATSSLIAVTCKSCPRCCSQ
TNKDGGCNHMVCTVCGFEWCWICHSPWSRTCQANHWF
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgcccgtggtctttcgttttaatgacaagtctgtgtcactgcatgtaaacgaaggttgg
agcatactgtttctcaaacagctcgtctgctcgaagcttgattgcgatccccatacccac
tttcttgcccaccaaggcgttcaactgagtgattgggacggagtttctaattttgctttc
ttgatatctgatgatgcttccattgatgttcttccacactccactatcaacaactgctac
gttctctgctatcactgtgataatgtgactcccgctgtatttaccactgtttgtgacaaa
tgtgcttctcccaacttcgaagttttgtctgatattgccaaccctgagattcaagcagta
agtggcacctgcaaagaatgcaacaacacctccgccaaagtttcaatcaactgctcaaag
gatgtaacccacagtccaaccattttcctgaaacaagtttttagaaacttcgaccacttg
ttatgcgttgcgtgctgcagcaaagccagcgacatcgtggttaagttttgtgaaaaccgt
ggccacatcctctgccttgactgctttcgcacttatgctgaaagctacctatccgacgcc
agatacgtgctaatttctgacatcggttatactcttccttgtccgcttggatgcccggtg
tcttacatttcggatacccatctttttcgtattctaggtaaagtgttctactcccgctac
aaggagttcgccgctaaactcttctgctacacagaaggttgtttatcttgtcccaattgt
ggaactttttgggaaagaccagatgacaaagctcagaacgcctgggtcacttgtgaggag
ccatacggctgtggagtggaattttgttccaattgtcgcagtattgtctccggtgaaggt
aacccctctcgatgcacatgtagacaaggtaaagcaactacagagcgatcactgcttgac
cagattactcgttgtggaatatttggtacttggagtggtgtccagttagactcttcggat
ttggcaacttcctctctcattgcagtgacctgtaagagctgccctcggtgttgcagtcag
accaataaagatggcggttgtaatcacatggtgtgcactgtttgtggtttcgaatggtgc
tggatatgtcactccccttggtccagaacttgtcaagcgaatcattggttctag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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