KEGG   Eucalyptus grandis (rose gum): 104414271
Entry
104414271         CDS       T03547                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03020  RNA polymerase
egr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104414271
  09124 Replication and repair
   03420 Nucleotide excision repair
    104414271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egr03021]
    104414271
   03400 DNA repair and recombination proteins [BR:egr03400]
    104414271
Transcription machinery [BR:egr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     104414271
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104414271
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD
Other DBs
NCBI-GeneID: 104414271
NCBI-ProteinID: XP_010023636
Position
8:35925810..35929556
AA seq 114 aa
MSTMKFCCECNNILYPKEDREEKILLFACRNCEHQEVADDNCVYRNEIHHSVGERTQVLQ
DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattctgctgcgaatgcaacaacatactgtatcccaaggaggacagg
gaggagaagatcctcctcttcgcttgccgcaactgcgagcaccaggaggttgccgatgac
aattgtgtctacagaaatgagatacatcactccgttggggagcgaactcaagttttgcag
gatgtagcagcagatccaactttacctcgtacaaaatctgtacgctgtgctcaatgtaac
catggcgaagctgtcttcttccaggccactgctagaggggaggaaggtatgacgctgttc
tttgtctgctgcaacccaaattgtggatatcgttggagagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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