KEGG   Eucalyptus grandis (rose gum): 104415090
Entry
104415090         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cell division control protein 48 homolog C
  KO
K14571  ribosome biogenesis ATPase
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104415090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:egr03009]
    104415090
Ribosome biogenesis [BR:egr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    104415090
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 AAA_22 AAA_14 AAA_16 AAA_2 TIP49 AAA_28 AAA_18 IstB_IS21 AAA_33 RNA_helicase AAA_17 nSTAND3 Rad17 Mg_chelatase Zeta_toxin Viral_helicase1 AAA_3 Vps4_C Parvo_NS1 TsaE AAA_19 NACHT ATPase_2 NB-ARC Nucleolin_bd Cytidylate_kin2 Bac_DnaA AAA_11
Other DBs
NCBI-GeneID: 104415090
NCBI-ProteinID: XP_010024633
Position
8:complement(55097831..55104145)
AA seq 832 aa
MRRRPRGGSSPASASVVNRKLLSRRLESYKHDRSTVEELVRQLCDAFPEYRRIKRHPFAN
AVREALESFSQKERRQLRSPSSREGSGDDDDDEEELERVGSSRKKSRRTDAMEERLQRFE
NDYIRRKRPRSSQEDSSSEPDDEEDGDEEDGDASTSEDAIYEEKVEPEFDLMKSMLRASY
VGEAAKPGKAKQDVKERQEKNIEVEISTKKPRRAIDMTNAGDAKSESEAKGEGSGSGSGW
NEGVTVKGKEGPRFKDLGGMKEVLEELKMEVIVPLYHPHLPRMLGVSPMAGILLHGPPGC
GKTKLAHAIANETGVPXYKISATEIVSGVSGASEENIRDLFLKAHKTAPSIVFIDEIDAI
ASKRENLQREMERRIVTQLMTCMDELHRPGKSTDKNADTESADTKPSYVLVIGATNRPDA
VDPALRRPGRFDREIGLGVPDENARVEILSVLTRALKLEGSFNFHKIARSTPGFVGADLA
ALANKAGNLAMKRILDERKLELSKNSMDVDSVDEWWRQPWLPEEMEKLAINMADFEEALK
MIQPSSRREGFSAIPNVKWEDVGGLDSLRQAFDRYIVRRIKYPEDYEEFGVDLETGFLLF
GPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAIRTLFSRARTCAPCILFFD
EVDALTKQRGTEGGWVVERLLNQLLIELDGADHRRGVFVIGATNRIEVIDSALLRPGRFG
KLHYVRLPSADERGLILKALGRKKPIDAGVDLEAIGQMEACQNLSGADLAALVNEAAMVA
LEEKLTLLGQHPDSPCTIKTAHFEQALTKISPSVSKMDIRVYEKLAVELKAA
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgcgaaggagaccgcgcggcggcagctcgccggcgtcggcatccgtggtgaacaggaag
ctcctctcccggcggctggagtcgtacaagcacgatcgctccaccgtggaagagctagtc
aggcaactctgcgacgccttccccgagtaccggcgaatcaagcgccatcccttcgcgaac
gccgttcgagaagccctagagtcgttcagccagaaggagcggcggcagctgcggtcgccg
agctcccgcgagggcagcggcgacgacgatgacgacgaggaggagctcgaaagggtcggt
tcctcgagaaagaagtcgaggaggacggacgcgatggaggagaggctgcagcggttcgag
aacgactacattcggaggaaacggccgcggagcagccaggaggattcgtcgagcgaacca
gacgatgaggaggatggagacgaagaggacggtgatgcatcgacgtcggaggatgcgatt
tacgaggagaaagtggagccggagttcgacttgatgaaatccatgctccgggcgagctac
gtcggcgaggcggcaaagcctggtaaagctaagcaagatgtgaaggagcggcaagagaag
aacattgaggtagagatttccactaagaagcctaggagagcgattgatatgacgaatgcg
ggtgatgcgaagtcggaatcggaagcgaagggcgaaggttcgggttcgggttcgggttgg
aacgagggggtgacggtgaaggggaaggaagggccgaggtttaaggatttgggaggaatg
aaggaagtcttggaagagctgaagatggaggtgatcgtgccgttgtatcacccgcatttg
ccgcggatgctcggggttagtccgatggcgggaatcttgttgcacgggccgcctggttgc
ggcaagaccaagttagcccatgccatcgccaatgagactggcgttcctntttacaagatt
tccgcaactgaaattgtctccggcgtctctggtgcatcagaagaaaacatccgagacctc
tttttgaaggcacacaagacagcgccttcaattgtattcattgatgagattgatgcaatt
gcctccaagcgagaaaatcttcagagagaaatggagagacggattgtgacacaattgatg
acttgtatggatgaattgcacaggccaggaaaatcaactgataagaatgcagacacggag
agcgctgatacaaagcctagctatgttcttgtaattggagcaaccaataggcctgatgct
gttgaccctgcattaaggaggcctggacgctttgatcgtgagattggtttgggcgttcct
gacgaaaatgccagggtcgagatcctttcagtgctcacacgtgcccttaaactcgaggga
tcttttaattttcataaaatagcaagatctactcctggctttgttggtgcagacttggca
gcgcttgctaacaaggctggtaaccttgccatgaagagaattttagatgaaagaaaactt
gaattatctaaaaattcaatggatgtggatagtgttgatgaatggtggcggcaaccttgg
ttacctgaggaaatggagaagctcgctattaatatggctgattttgaggaggcattgaaa
atgatccaaccctcttctagaagggaaggattttctgcaatccctaatgttaaatgggaa
gatgttggaggtcttgattctttgaggcaggcatttgaccggtatattgtcagacgtata
aaatatccggaggactatgaggagtttggagtggatctagagacaggttttctgcttttt
gggcctcctggttgtggtaaaactctgattgccaaggcagttgccaatgaggctggagct
aactttattcacatcaagggccctgagctattgaacaagtatgttggagaaagtgagctg
gcaattcgaacattgtttagccgtgctaggacctgtgcgccatgcatacttttctttgat
gaggtggatgctttaacaaagcagcgtggcacagaaggtggatgggttgttgagcgactg
ttgaatcagttgcttatagagctagacggcgcagaccatcgacgtggtgtttttgtgatt
ggggccacaaatagaatcgaggtcatagacagtgctctcttgcgtccagggaggttcgga
aaacttcattatgttcgcttgccaagtgctgatgagcgtggtttaattttgaaagctcta
ggtaggaagaagcctattgatgctggtgtggatttagaagccatcgggcagatggaggcc
tgtcagaatctaagtggcgctgatcttgctgcactggttaatgaagctgcaatggttgct
cttgaagagaagttgacattgttgggtcagcatccagattctccgtgcaccataaagaca
gctcattttgagcaggcactaactaaaatttctccctctgtatcaaagatggacatacga
gtttatgagaaattggctgtggaattaaaagcagcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (32)   
   Pfam (32)   
All databases (58)   

Download RDF
DBGET integrated database retrieval system