KEGG   Eucalyptus grandis (rose gum): 104418506
Entry
104418506         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: small RNA degrading nuclease 3
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104418506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:egr03009]
    104418506
Ribosome biogenesis [BR:egr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    104418506
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 HIP1_clath_bdg OmpH Bap31_Bap29_C
Other DBs
NCBI-GeneID: 104418506
NCBI-ProteinID: XP_010028179
UniProt: A0A059ALY5
Position
9:19082712..19089637
AA seq 521 aa
MEDQLDMAEKKVLVEVVKMAQKRGMSGAKGVWKDFLNSYDKQLGASLSDPSRRSKEVLAA
FLKTFTDENDLKLFAKVIQCHSNRALTELFKEESPQHKSPEQRLVRLTLEHPQYPSEYSF
PSYEEEWVVIKLKKKSKVMRSTNLVAVDCEMVLCEDGTEACVRVCVVDRNLKVKLNEFVN
PGKAIADYRTEITGIAAADLDGVKCSLSDVQTSMKKLLSHGTILVGHSLNNDLQALKLDH
ARVIDTSYIFKYSDAPFQRKPSLNNLCKSVLGYEVREKGAPHNCLDDACAAMKLVLAVVE
RGCDTNIPCLHDVVPDSEVAKLLLHRIPRIVPIGELHGAMPGEFRVEPKSSKNARGDTYS
ALAVFSSMEEAHRVYESLXGTLEKDSFGRSQKVITFHLSTGTEANLCVRETMHDNSLGQL
LKKRAAEMLDSGELKKLKVSKIGEIEVAAVNQCTDHLKEIERLKEELRQKDLQIVNRCED
HSKEIERLKHELSQKDLEISVLHKIVQQHKEKELRRKSKKF
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggaagaccagctggacatggcagagaaaaaagttcttgttgaagtggtgaaaatggcc
cagaaacggggaatgagcggtgctaaaggagtgtggaaggattttttgaacagttatgac
aagcaattaggggcctctttgagtgatccctccaggaggtccaaggaggttttggctgct
ttcttgaagactttcactgatgagaacgatttgaagctttttgcgaaagttattcagtgc
cattcgaaccgtgccctaacggagctattcaaagaggaatctccacagcataagtccccg
gagcagagattagttcgtctcactttggaacatccgcaatacccgtcggaatattctttc
ccatcatacgaagaggaatgggtggttataaagctcaagaaaaagtccaaggtgatgaga
tcaaccaatttggttgctgtcgactgtgagatggtgctatgtgaagatggcactgaagct
tgtgtgagagtatgtgttgtggatcgcaatctgaaggtcaaacttaatgagtttgtgaat
cctggtaaagcaattgcagattacagaactgagattacgggaattgctgcagctgatttg
gatggagttaaatgctcattatcagatgtacagacatctatgaagaagctattatcacat
ggaactattctagttggccacagtttgaacaatgatttgcaagcactgaagctggatcat
gcgagagtaattgatacctcttacatcttcaagtattctgatgcaccttttcaaagaaag
ccatctttaaataatctgtgtaagtctgttctgggctatgaagttagagagaagggtgca
ccacataattgtctagatgatgcttgtgctgcaatgaagcttgttcttgctgttgttgag
cgtggatgcgatacaaatattccgtgtctccatgatgttgtacctgattccgaagtggcc
aagctgctgcttcacaggatacctagaattgtgcccattggagaattacatggagcaatg
cctggggaatttagagttgaaccaaagtcatctaagaatgctcgtggggatacgtattca
gctttggctgttttcagcagtatggaagaggcacatcgagtctatgaaagtttangaggc
actttagagaaggactcatttggacggtctcagaaagtaattacatttcatctcagtacc
ggtactgaggctaatttatgcgtccgtgaaacaatgcacgacaactccctcggtcagttg
ttaaagaagagagcagccgagatgttggattctggggaattgaaaaaactgaaggtgagc
aagattggagagattgaggtggcagctgttaatcagtgcactgatcacttgaaagagatc
gagagattgaaggaggagctgaggcaaaaggatcttcaaatagtaaatcggtgtgaagac
cactcaaaagagattgaaagattgaagcatgagttatcccaaaaggatcttgagatctct
gttctccacaagattgtgcaacaacataaggaaaaagagctgcggagaaaatcaaagaag
ttctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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