KEGG   Eucalyptus grandis (rose gum): 104419244
Entry
104419244         CDS       T03547                                 
Name
(RefSeq) polygalacturonase At1g48100 isoform X1
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr00040  Pentose and glucuronate interconversions
egr01100  Metabolic pathways
Module
egr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:egr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    104419244
Enzymes [BR:egr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     104419244
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 104419244
NCBI-ProteinID: XP_010029152
Position
9:31132069..31135466
AA seq 502 aa
MTKINLKNDASLLLIAIFILSASLGTCYGREGKRWRHSEAHPLKKGEGHRDGHQHHHQHH
RRLSPKVMGDGYTVPHETMTSLAGSSGSTTTFNVLDYGAKGDGHADDTKAFEAAWAAACP
VAASTLVVPSGSVFMVKPISFSGPNCKPGIVFQLDGKIIAPTSSQAWGSGLLQWIEFTKL
TTIKIQGKGIIDGQGSVWWNDSPTVNPTDELDSISSTAQSPTNSSKDMISTNLSGMPSTK
PTALRFYGSTDVTVNGITLQNSPQAHLKFDSCTDVQVFGVTITSPGNSPNTDGIHLQNSQ
NMLIYSTNIACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKDNTKACVSNITVRDT
TITGTLTGVRIKTWQGGSGSAQDIMFSNIQVSEVQTPIVIDQFYCDKGKCQNETAAVAVS
GINYMNIKGTYTVQPVHFACSDSLPCIGVSLTTIQLKPVQGSHWYDPFCWETYGELKTAT
EPPISCLQKGKPSKLPSQLVSC
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgactaagatcaatctgaagaatgacgcctcccttcttctcattgccattttcattttg
agtgcaagtttggggacttgctatggcagagaaggcaagcgttggaggcacagcgaagct
cacccactgaaaaagggagaaggtcatcgagatggacaccaacaccaccatcaacatcac
cgccgcctttcgccgaaggtgatgggagacgggtacactgttcctcatgagactatgaca
agtttagcaggaagttcagggagtactaccacctttaatgtgctggactatggggctaaa
ggtgatggacatgctgatgatacaaaggcatttgaagcagcttgggcagcagcatgtcca
gtggcggcatcaacgctggtggtcccatctgggtccgtgtttatggttaaaccaatctct
ttttcagggcctaattgcaaaccgggcattgtgtttcagttagatggcaagattattgct
ccaacaagctctcaggcttggggatcaggtctcctccaatggattgaattcacaaagctt
acaacgatcaaaattcagggaaagggcatcatagatggacaaggctcggtgtggtggaat
gattcacccactgttaatccaacagacgagttggattcgatctcctccacagcccaaagt
ccaacaaatagctccaaggatatgataagtactaatctaagtggaatgccaagcaccaag
cccacggcacttaggttctatggaagcactgatgtaacagtcaatgggataaccttacag
aacagccctcaggcccacctgaagttcgactcttgcacagatgtccaggtttttggtgtt
actataacttcccctggaaacagccccaacactgatggaatccatctacagaattcccaa
aatatgctaatttacagcacaaatattgcttgtggagatgactgtgtatcgatacagact
ggatgctccaatgtgtacatacacaatgtaaattgcggaccaggacatggtatcagtatc
ggaggactaggaaaggacaacactaaagcttgtgtctcgaacatcaccgtccgagacaca
acaattactggaacattaactggagtcaggataaagacatggcagggaggatcaggatct
gcacaagatatcatgttctcaaacatccaagtatcagaggttcaaactcctattgtgatt
gaccagttctactgtgacaaaggaaaatgccagaatgaaacagcagccgtggcagtttca
ggcataaactacatgaacataaaaggaacttacacagtgcaacctgtacattttgcctgc
agtgacagcttgccttgcattggtgtgtcccttacaaccatacagttgaaaccggttcaa
ggcagccactggtatgaccccttttgctgggagacatatggtgagttgaaaactgccaca
gaacctccaatcagctgcttacagaaaggaaagccatcaaagttgccgtctcagcttgtt
tcatgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system