KEGG   Eucalyptus grandis (rose gum): 104421643
Entry
104421643         CDS       T03547                                 
Name
(RefSeq) exosome complex component RRP41-like
  KO
K12587  exosome complex component MTR3
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104421643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104421643
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104421643
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 104421643
NCBI-ProteinID: XP_010031968
UniProt: A0A059ACJ5
Position
10:10161460..10166465
AA seq 258 aa
MAGGASATAPSTYSPSPNQKKKPPLFKDGDLDWVRPDGREFHQCRPAFFRTGAVNAAAGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDMGRLNCNVSYTTFATAVRGQVLDQKESSSMLH
KALEGAIRLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVTAVSVSC
LGPNLVIDPISEEESYQDGSLMITCMPSRYEVTQLTITGEWSSARINEAMQLCLDACSKL
GKVMRSCLKEAASASEES
NT seq 777 nt   +upstreamnt  +downstreamnt
atggccggcggagcgagcgcgacggcgccctcgacgtactcgccgtcgccgaaccagaag
aagaagccgccgctcttcaaggacggcgacctcgactgggtccgccccgacggccgcgaa
tttcaccagtgccggcccgcttttttcagaactggcgcagttaatgctgctgctggatct
gcttatgctgaatttggcaataccaaagtcatagtatcagtatttggccccagagaaagt
aaaaaggcaatgatgtacagtgatatgggccgattgaactgtaatgtcagttatacgact
tttgccactgcagttaggggacaggttttggatcagaaagagtcctcgtcgatgcttcat
aaagctttggagggtgcaattaggttggaaacttttccgaagacaactgttgatgtattt
gcactggttttggaatctggcgggagtgatttgcctgtggtaatatcttgtgctagtctt
gccttggcagatgctggaattatgctctatgatcttgtgactgctgtttctgtgtcttgt
ttgggtccaaatcttgtcatcgatccgatatcagaagaagaaagctaccaagatggaagt
ctgatgataacttgcatgccttctcgttatgaagtcacccagctaaccatcactggagaa
tggtcgagcgcaaggataaatgaggctatgcagctttgccttgatgcctgctcaaagctc
gggaaggtcatgagatcatgcttgaaagaagctgcttccgcatccgaggagagttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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