KEGG   Eucalyptus grandis (rose gum): 104421868
Entry
104421868         CDS       T03547                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104421868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egr03021]
    104421868
Enzymes [BR:egr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104421868
Transcription machinery [BR:egr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104421868
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3
Other DBs
NCBI-GeneID: 104421868
NCBI-ProteinID: XP_010032299
UniProt: A0A059AE95
Position
10:complement(13322765..13337311)
AA seq 1814 aa
MEETSTAALDAEITAISFGLASRQEICAASVSDCSITHSSQLSNPFLGLPLEFGRCESCG
TSDPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKMRNNKFPIKNAGVGERLL
ASCCEDAAQVSMREVKTSEGVHCLQLKVSSRSRLRDGFWNFLERYGFRYGDNISRPLLPC
EVVEMLKRIPEETKRKLAGKGYFPQEGYIIQYLPVPPNCLSVPEVSDGVSVMSSDLSVTM
LKKVLKQVEIIKGSRSGAPNFESHDVEAQDLQNVVNEYLLVRGTAKASRDIDTRYGIGKE
PSDTATKAWLEKMRTLFIRKGSGFSSRSVITGDAFKKVNEIGIPAEIAQRITFEEKVSMY
NMDYLQGLVDKKLCLAYRDGSAMYSLREGSKGHTSLRPGQVVHRRIMDGDIVFINRPPTT
HKHSLQALSVYVHDDHTVKINPLICGPLGADFDGDCVHLFYPQSASAKAEVVELFSVEKQ
LLSSHSGNLNLQLATDSLLSLKMMFRKYFFDKLAAQQLAMFVSSDLPHPALLKAHQFCPT
WTALQMLQTALPAGFNCCGDKYLISKSDLLDVDYSREFIVPMISEIVTSIFFEKSPVEVL
KFFDALQPLLMENLFTEGFSVCLEDFYIPQSMIQDIQKNIQVISPLLYHLRTTHNELVQL
QLENHLRLAKLPLSRFILKSSALGDLVDSKSDSAINKIIQQIGFLGVQISDKGKFYSTSL
FDEMASLFRSKYFFEGADYPSGEYGLIKSSFICGLDPYEMMVHSICTREVIVRSTRGLSE
PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGSEVGGKPENLFPAGEPVGVLAAT
AMSNPAYKAVLDSSPSSNSSWELMKEILQCRVNFRNEPIDRRVILYLNRCGCGRKHCSEN
AACLVKTHLKKVSLKDLTVGFMIEYKELRTVLESSEAHAGLVGHIHLDEVHLKELNISMV
DVLKQCQETINSFRKKKKVGNLFKGTVLSVSDGCSFQPQCAGGRSQMPCLMFSCLDANDP
QLEKITHVLANKICPVILDTIIKGDPRISSANIVWINPDTTSWIRNSRRNQKGELALDIV
LEKSVCKRSGDAWRIVLDSCLPVLHLIDTKRSIPYAIKQVEELLGISCAFDQAIQRLSTS
VAMVAKGVLKEHLMLLADSMTCSGSLIGFNSAGYKAFSQSLNVQVPFTEATLFTPRRCFE
RASVKCHVDALSSVVASCSWGKRVAVGTGSKFDILWGTKDGVDSKQEGAADVYSFLHMVR
GPSMQATGDSTCLGIDVEHLDWEDENTELNRSPENNSEKPVFEDDVQPWDKVTSVDDWDA
SASWEKNGKDSTTPGNNGQSTAWSNWGSKKAESQVIDSQVDNTKSSWNSSTSWDKEADAN
QLRDHNSPSWGNGRADDDGFHSTKDNENSSKSGGWGAAAWGSDGGSQSRKSWDVSEKSMI
DETQSKSEQQGHGWETKSWGKKPDDEMGWDGARSVKDKSGRADLDDFTKADEQPSKSGGW
DAAIGVMNEAGSQSEKGWNSSQTVETEKESQRETTGWGKRAEGSEVSRGGWNSSQNADDT
SKRVYEDGSQLGKPWNISQSPKAKESDKQSQWEATGWGQKAGDGEGWNSQNSKAEGTEKS
SPWERQNQWGGDSKKKSKGQHSEWKMRRSLSRPRDMINEDPAAPRMFTATRQRLDMFTSE
EQDILTDVEPIMQSIRRIMHQSGYNDNDPLSAEDQTYVVDNVLNHHPDKAAKMGAGIDHL
TVSRHSSFPDSRCFYVESTDGSRVDFSYRKCLENFVKTKYPDAAELFVGKYFKRPRSDGK
REQSVAPEEATENR
NT seq 5445 nt   +upstreamnt  +downstreamnt
atggaggaaacttcgacagctgctctagatgcggagataacagcaatcagttttggcttg
gcatctcgacaggagatttgcgcagcatccgtcagtgattgctccattactcattcaagt
cagctttctaatccatttcttggcttgcctcttgaatttgggaggtgtgaatcatgtggc
acatctgacccgggtaaatgtgaaggtcattttgggtatatcgaattaccaataccaata
tatcatccgagccatgttagtgaactcaagcgaatgttaagcttgctgtgtttaaagtgc
ttaaaaatgagaaacaacaagtttccaatcaagaatgctggtgtgggtgaacgactattg
gcttcatgctgtgaggatgcagcacaagtttctatgagagaggttaagacatcagaaggt
gtacactgcttgcagttgaaggtatcatcgaggtcaagattacgagatggtttttggaac
tttcttgaaagatacggttttcgatatggtgacaatatttcgcgacctctattgccttgt
gaggttgtggaaatgctcaaaagaattcctgaggagaccaaaaggaaacttgctgggaaa
ggatactttccccaagaaggatatattatccagtatctacctgttccgccaaattgtttg
tctgttccggaagtttctgatggtgttagcgttatgtcctcggatctttcagtgacaatg
ttgaaaaaggttctcaagcaagttgagatcatcaaaggttcaaggtcaggagctcctaat
tttgagtcccatgatgtggaggctcaagatttgcaaaacgtagtcaatgagtatctatta
gtcagaggtactgcaaaggcgtctcgagatattgatacacgctatgggattggtaaagag
ccatcggatactgctaccaaagcatggctggagaaaatgaggacgttgtttattaggaaa
ggctcaggattttcctctcgcagtgtgatcacaggtgatgcctttaagaaggtcaatgaa
ataggcattcctgctgagattgcgcagagaataacatttgaggagaaggttagcatgtat
aacatggattatttgcaaggtctggtggataagaagttgtgtctggcatacagagatggt
tcagccatgtattcactcagagagggttccaaagggcatacctctttgaggcccggccaa
gttgttcatcgcaggattatggatggggacattgtgtttatcaatagaccaccgaccaca
cataagcactctctacaagcattgtcagtgtatgtccatgatgatcacacagtgaagata
aatcccctgatctgtggacctcttggtgctgacttcgatggggattgcgtccacttattt
tatcctcagtcagcatcagcaaaggcagaggttgtagaactcttttctgtggagaagcag
ttgctgagctcacatagtgggaacttgaatctgcaactagctaccgattccttgttgtcg
ttgaagatgatgtttaggaagtatttctttgacaagttagctgctcagcaattggcaatg
tttgtttcatcagatttgccacatcctgctttgttgaaagctcaccagttctgtcctacc
tggacggctttacagatgttgcaaactgctttgcccgcaggctttaactgttgtggggat
aagtacttgattagtaaaagtgatctattggatgtggattacagcagggaattcattgtg
cccatgataagtgaaattgttacatcgatattttttgagaaaagtcctgtggaggttttg
aagttttttgatgcacttcagccgttactgatggaaaacttatttacagaaggctttagt
gtgtgtctagaggatttctatataccccaatcaatgattcaagatattcagaagaacatt
caggtgatatcgccactgctgtatcacctaagaacaactcacaatgaactggtgcaattg
cagctggaaaatcaccttcgactggcaaaactgccgttgtcgcgatttatcttgaagtca
tctgcgcttggtgatcttgtggactcgaaaagtgattcagcaatcaataagatcattcaa
caaattgggtttctgggtgttcaaatctcagacaagggaaaattctattccacctcattg
tttgatgagatggcctccctttttaggagcaaatatttctttgagggagctgattatcca
tctggtgagtacggattaatcaagagctccttcatttgtgggttggacccatatgagatg
atggtccattctatatgcacaagggaggtcattgtacgatccacaaggggattgtctgaa
ccaggaaccctctttaaaaacctaatggccatccttcgagatgtagtcatatgctatgat
ggcactgtgcggaatgtttgcagcaattcaataatccaatttgagtatggttctgaggtt
ggaggcaagcccgaaaatcttttccctgcaggtgagccggttggtgtattagcagcaact
gccatgtcaaatcctgcttataaagcagttcttgattcttctcctagtagtaattcctca
tgggagctaatgaaggagatactgcaatgccgagtcaactttagaaacgaaccaatcgat
cgccgtgtaattttgtacttgaatcgatgtggttgtggaaggaagcactgcagtgaaaat
gctgcatgtttagtcaagactcacttgaagaaagtgagtctcaaagatctcacagttggc
ttcatgatcgagtataaagaactacggacggtgttggaaagctctgaagctcatgctgga
ctggtcggtcatattcatctcgatgaggtgcatctgaaagaattgaacatctcgatggtt
gatgttctgaagcagtgccaagagaccatcaactcattccgcaagaagaaaaaagttggt
aatcttttcaaggggacagtgctatctgtcagtgatggctgctctttccagccacaatgt
gcaggtgggagatcccaaatgccatgcttgatgttctcctgtttggatgcaaatgatcct
caattagagaaaatcacgcatgttcttgccaacaagatttgtcctgttatacttgataca
atcatcaaaggtgacccccggattagctctgcaaacattgtctggatcaatcctgataca
acatcatggataagaaactctcgcaggaatcagaagggtgaactggccctggatatcgtt
cttgaaaagtcggtatgcaaaagaagtggtgatgcatggaggattgttctggactcatgc
cttcctgtactccatttaattgacacaaaacgctctattccatatgcaataaagcaagtt
gaggaattgcttggaatatcatgtgcttttgatcaggcaatccagcgtctttcaacatca
gttgcgatggtggccaaaggcgttctgaaggagcatctgatgctccttgctgacagcatg
acttgctctggaagtctgattggcttcaattctgctggatataaagcgttttcccagtca
ctgaatgtccaagttccattcactgaagcaacactatttactcccagaagatgctttgag
agagcttcggtgaagtgtcacgtggatgctttgtcaagtgtcgtggcatcttgttcctgg
ggcaaacgtgttgctgtaggcacaggctccaagtttgatatcctctggggcacaaaagac
ggggtggattcaaaacaggaaggtgctgccgatgtgtatagtttccttcatatggtaaga
gggcctagtatgcaagcaacaggagattctacatgtctcggcatagatgttgagcatctt
gactgggaagacgaaaacacagagctcaacagatctccagaaaacaattctgagaaaccc
gtttttgaagatgatgttcagccgtgggacaaggtcacatctgtagatgattgggatgct
agtgcttcttgggagaagaatggcaaagattcaaccactccaggaaacaatggacaatca
actgcatggtctaattggggatctaagaaagcggagagccaagttatagattctcaagtg
gataatacaaagagcagttggaacagttcaacttcctgggataaagaagccgatgccaac
cagttacgtgatcataactcaccgagctgggggaatggtagagctgatgatgatggtttc
cattctacaaaggacaatgaaaattcttccaaatctggtggatggggggctgctgcctgg
ggtagtgatggtggctctcagagcagaaagagctgggatgtttctgaaaaatctatgatt
gatgaaactcaaagtaaatcggaacagcaaggccatggatgggaaaccaaaagctggggg
aaaaaaccagatgatgaaatgggttgggatggtgctcgaagtgtcaaagataagtctgga
agagctgatctggatgattttaccaaagccgatgaacaaccttctaaatctggtggatgg
gatgctgccattggtgtcatgaatgaagctggttctcaaagtgaaaaaggttggaatagt
tctcaaactgtggaaactgaaaaagagagtcaacgggaaactacaggctggggcaaaagg
gctgagggcagcgaggtgtctcgagggggttggaacagttctcaaaatgcagatgataca
tccaaaagagtttatgaagatggctctcaacttggaaaaccttggaatatttctcaaagc
cctaaagctaaagaatctgacaaacagagtcaatgggaagccacaggctggggacaaaag
gctggggatggagaaggttggaattctcaaaattccaaagctgagggaacagaaaaatcg
agtccatgggagcggcagaaccaatggggaggagattcaaagaagaaaagcaagggacag
catagtgaatggaaaatgagaaggagcctttcacggcctcgtgatatgataaatgaggac
ccagctgctcctcgcatgttcacagcaacaaggcaaagattagacatgttcacatcagag
gaacaagatatacttacagatgtggaaccgatcatgcagtcaatacgaaggataatgcat
cagtctgggtacaatgacaatgatccgctgtcagctgaggatcaaacctatgtagttgat
aatgttctcaaccaccatccagataaagctgctaagatgggagcaggaatcgatcatctg
acggttagcagacatagcagcttcccagacagccgatgcttctacgtggagtccactgac
ggttctcgggtggacttttcataccggaagtgtctagagaactttgtcaagaccaagtac
cctgatgctgctgagctgtttgtcggaaaatacttcaaaaggccccgctccgacggcaaa
cgggagcagagtgttgccccagaagaggctacagaaaatagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (60)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (74)   

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