KEGG   Eucalyptus grandis (rose gum): 104422015
Entry
104422015         CDS       T03547                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104422015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egr03041]
    104422015
   03400 DNA repair and recombination proteins [BR:egr03400]
    104422015
Spliceosome [BR:egr03041]
 Complex B
  Other components
   Prp19 complex
    104422015
 Complex C
   Prp19-CDC5 complex
    104422015
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104422015
SSDB
Motif
Pfam: BCAS2 ORC3_ins Plk4_PB2 CP12
Other DBs
NCBI-GeneID: 104422015
NCBI-ProteinID: XP_010032529
UniProt: A0A059D0J7
Position
2:complement(10372756..10375884)
AA seq 273 aa
MGRSSAAAAAAATAAAAAVAAGGADANGDVLMLEAPPDALARPWTTPSNAETIDALPYID
EDYGHPAVKGEVDRLVEEEMRRSSKKPSDFLKELPPVPKLKFQNNPMLAREYERVMAGRP
PAPFDSSRYNIDMVPPHRRDDQNLWKQALQRNQRLLQYEVIRLENLDLMSKHGADVWIKH
NRQLEGFLARLQKLASEQNEQIETVNRERKYHQQNTAYELSALSTQWRELCQKNIEIQAA
CVNIENELEELKREAAERGWKLETTMENGPSLP
NT seq 822 nt   +upstreamnt  +downstreamnt
atgggtcggagcagcgccgccgccgccgccgccgctaccgccgccgccgccgccgtcgcg
gccggcggcgccgacgccaacggcgacgtcctcatgctcgaggccccgccggacgctctc
gcccggccgtggacgacgccgtccaacgcggagacgatcgacgccctgccctacatcgac
gaggactacggccaccccgccgtcaagggcgaggtggaccgcctcgtcgaggaggagatg
cggcggagctccaagaagccctcggatttcctcaaggagctgcctccggtccccaagctc
aagtttcagaataatcctatgcttgctagagagtatgagcgtgtgatggcaggaaggccc
cctgcaccttttgattcctcacggtacaatattgatatggtacctccacatagaagggat
gatcaaaatctttggaagcaggcactgcaaagaaatcaacgcttgctgcagtatgaggtt
atcaggctggaaaatcttgatttgatgtctaaacatggtgctgatgtctggattaagcat
aaccggcagttggagggatttttagctaggctgcaaaagttagctagtgagcaaaatgag
cagattgagactgtgaaccgtgaaagaaaatatcatcagcaaaatactgcatatgagctt
agtgctctgtctacacaatggagggagctttgtcagaaaaatatagaaattcaggctgct
tgtgtcaatattgaaaatgagctagaagagctaaagagagaggctgcagagaggggttgg
aagttggaaaccactatggagaatggtccttctctaccttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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