KEGG   Eucalyptus grandis (rose gum): 104422539
Entry
104422539         CDS       T03547                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104422539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egr03021]
    104422539
Enzymes [BR:egr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104422539
Transcription machinery [BR:egr03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     104422539
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 104422539
NCBI-ProteinID: XP_010033188
Position
10:27144358..27166144
AA seq 1393 aa
MKAASHVFTKEPYVENVGPRRIKSIHFSMFSASEIGNVAEVQVYKGVYYDGTRKPLEGGL
LDPRMGPANKSCRCSTCHGDFKDCPGHYGYLTLALPVYNVGFLDKILEVLKSLCKSCSRI
LLDEESRRKELEKIRHPKRDALNKAELAKKTVSKCKPGRCAHCGYINGTVKKAIGAISYI
HDRSKTSDRSLEECKSAISHTKESKGSLSVASNIINPRDVLSLFERMSDEDCELLNIADR
PEKFMITTIAVPPIAIRPSVMMEGSQSNENDITERLKRIIQVNASLQQELQDMKNMAAWD
HLQAEVGLYINSDVRGVPYPFQVAKPLAGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISP
DPNLKITEVAIPIQMARILTYPERVNQYNIEKLRQCVRNGPYKYPGARMIRYPDGEMRLL
MGSFRKRLADELGFGVIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARVMPWRTLRFNESV
CNPYNADFDGDEMNMHVPQTEEARAEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLI
TRKDIFYDRAAFSLICSYMGDGMDLIDLPTPAIIKPIELWTGKQIFSVLLRPNARMRVFV
NLTLKEKNYSKPKNASERELETMCPNDGFVYFRNSELISGQLGKATLGNGNKDGLYSILL
RDYNAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPDNDLNERKRETILNGYNSCDEKI
ELYNKGKLDLQPGCDAAQTLEAVITGILNQIRNETGQVCMKKLHWRNSPLIMSQCGSKGS
PINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRQSKTPAAKGFVANSFYSGLTATEFF
FHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDNTVRNASGCIVQFLYGDDGMD
PALMEGKNGFPLNFDRLFMKVKATCPSREHKYLSPVEISALIEQKLPESESTPDGGLSDA
SKAFKKSVKAFLLEEHEKGSEIIMKFGEDATVENQETVIRVAQKIGGITEGQLRAFIDTC
MSRYHLKRIEAGSAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAK
KILTPIITAELDRDDNVNIARMVKARIDKTVLGQIAKSIKTVMTSRLGSIVITLDMNRIE
DSQLCIDANTVRESIMQTPKIKPKQLQINVLDVTKLEVVPLVDRGKLHFELHSLKNMLPN
VIVKGIKTVERAVVNKGKEKYKDKEGKVKEREKYSLVVEGTGLQEVMGTEGVDGRKTKSN
HIIEIQQTLGIEAARWCIIEEIQFIMSNHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQ
KMDKSVLMLASFEKTSDHLFHASASGKADKIEGVSECIIMGVPMQLGTGILKVIQRDEKP
ELTYASDPIISAY
NT seq 4182 nt   +upstreamnt  +downstreamnt
atgaaggcggcgtcgcatgtgttcaccaaggagccttacgtcgagaatgtcgggcctcgc
aggatcaagagcattcatttctcgatgttctccgcctcggagatcggaaatgttgcggaa
gttcaggtgtataaaggcgtctactacgacgggactcgtaagccgttggagggcggcttg
ttggatccacgcatgggtcctgcaaacaagagttgcaggtgcagtacatgccatggagat
tttaaggattgtccagggcattatgggtacctgactctcgctctacctgtctataatgtt
ggatttcttgacaaaattctggaggtcttgaagtctttatgcaagtcatgttcacggata
cttttggatgaggaatcacgcagaaaagagttggagaagataagacatccgaagagggat
gctttaaacaaagccgagcttgcaaagaaaacagtcagcaagtgtaaaccagggagatgt
gcccattgcggatacataaatggcacagtgaaaaaagccattggtgcaattagctacatt
catgaccgttcaaagactagtgacaggagcctggaagagtgtaaatctgcaatttcccac
acaaaagagtccaaggggtccttgagtgtggctagtaatatcattaatccccgggatgtt
ctgtctctctttgaaaggatgtcagatgaggattgtgaattgctcaatatcgcagacagg
ccagagaaatttatgataacaaccatagctgtgccaccaatagcaattcgtccttcagtc
atgatggaaggatcgcagagtaatgaaaatgacatcacagagaggttaaaaagaattatt
caggtcaatgcttcacttcagcaagaacttcaagacatgaaaaatatggctgcctgggat
catctccaagctgaggttgggttatatataaacagtgatgttcgtggtgttccataccct
ttccaagtagccaaaccattggccggtttcattcagcgtcttaaaggaaagcaggggcgt
tttcgtggaaatttatctggtaagcgagtggagtatactggaaggacagtcatatcacct
gaccccaatctgaagataacagaggttgcaatccccatccaaatggctcggatcttgact
tatcctgagcgtgtcaaccaatacaatatcgagaaattgagacaatgtgttcgcaatggc
ccttacaagtatcccggtgcaaggatgattagataccctgatggtgaaatgaggcttctg
atgggaagctttaggaagcgccttgctgatgagttaggatttggtgtcatagtcgaccgc
cacttggaagatggtgatgttgttcttttcaacagacaaccaagcttacatcggatgtct
atcatgtgccatagggcaagagtaatgccatggagaacattgagattcaatgaatctgtt
tgcaacccatataatgccgattttgatggagatgagatgaatatgcatgttcctcaaaca
gaagaggctcgtgcagaggctttaatgttgatgggggtgcaaaacaatttatgcaccccc
aaaaatggagaaattttggttgcttcaactcaagattttcttacatcctcttttctcata
acaaggaaggacatattctatgaccgggcagccttttccctcatatgttcttacatggga
gatggcatggatctcattgatctgccaacgccagcgataattaagccaatagaactctgg
acaggaaagcagatatttagcgttttactgcgccccaatgcacgcatgagagtcttcgtg
aatctgactctgaaggagaaaaattatagcaagcctaaaaatgcgtcagagagggaacta
gaaacgatgtgccctaatgatggttttgtttatttccgtaacagtgagcttatatcggga
caacttggaaaggcaactttaggtaatgggaacaaggatggtctttattctatcctcctc
agggactacaatgcacatgctgctgcttcttgtatgaatcgtcttgctaaactgagtgcc
cggtggattggaaatcacgggttctccattggtattgatgatgtacaaccggataatgat
ctgaatgaaaggaagagagagaccattttgaatggttataatagttgtgatgaaaaaata
gagctctataacaaaggaaagctggatctccaacctggttgtgatgctgctcaaacactg
gaggctgtgatcactggtattttaaatcaaattcgaaatgagactgggcaggtgtgcatg
aagaaactccattggagaaatagtccattgatcatgtcacaatgtggttcaaaaggatct
cccatcaatattagccaaatgattgcatgtgtcggtcagcagtcggttgggggtcgtcgt
gcacctaatggattcattgatcggagtcttcctcattttccaagacaatcgaagacacct
gcagctaaaggtttcgttgccaattcattttacagcggtttgacagctacggaatttttc
tttcatacaatgggaggacgagaaggcctggttgatacggcggtgaaaacagctgatact
ggctacatgtctcgtagacttatcaaggctttggaagacttgtctattcattatgacaac
acagtaagaaatgcaagtggatgcattgttcaattcctttatggtgacgatggcatggat
cctgcacttatggaaggaaaaaatgggttccctttgaatttcgacagattatttatgaaa
gtgaaggcaacttgcccttctagagaacataagtatctatctcctgtggaaatatctgca
ttgatagaacaaaagctaccagaaagtgaaagtactccggatggagggctctcagatgct
tccaaagccttcaagaaatctgtgaaagccttcctacttgaagaacatgagaaaggatcg
gaaatcattatgaagtttggtgaagatgcaacagtggaaaatcaggagactgtcattcga
gttgcccagaaaataggtggaattactgaaggacagctaagggcctttatagacacctgc
atgtctcgttatcatttaaaaagaattgaagctggaagtgcaattggagcaattggggct
cagagtattggagaaccagggacacagatgacactcaaaactttccattttgctggtgtt
gccagcatgaatgtaacacttggagttcctcgtattaaagagatcataaatggagccaag
aaaatactcactcccatcatcactgcagagctagatcgtgatgataatgtgaatattgct
aggatggtaaaggctaggattgataagaccgttttaggccagattgcaaagagcataaag
actgttatgacttcaagattagggtcaatagtcatcacgcttgacatgaatagaattgaa
gactcacagttatgtatagatgctaatactgtgagagagtcaattatgcaaactccaaaa
attaaaccgaagcagctgcaaattaatgttttggatgttacaaaattggaagttgttcct
ctggttgatagaggtaaacttcattttgagctccattccctcaagaatatgcttccaaat
gtcatagtgaagggaatcaagacggttgagcgtgcagtggtaaacaaagggaaagaaaaa
tataaggacaaggaagggaaggtgaaggagagggagaagtacagtcttgtagtggaaggc
acaggtctgcaagaagtcatgggcaccgaaggtgttgatggtcggaaaacgaaaagtaat
catatcattgagatacagcagacgcttggaatagaagctgctagatggtgcatcattgag
gagatacagttcatcatgtcgaatcatggcatgagcatagacatacgccatatgatgctt
ttggcagatctaatgacttttcggggtgaagttcttggcattacaaggttcggcatacag
aaaatggacaaaagcgttttgatgttggcttcattcgagaaaacatctgatcacctgttc
cacgcttctgcaagtggtaaggctgacaaaattgaaggtgtcagtgaatgcatcatcatg
ggggtgccaatgcaattgggcacaggaattttgaaagtgatccaaagggatgaaaaacca
gaactgacatatgcatcagatccaatcatatcagcttattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (48)   

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