KEGG   Eucalyptus grandis (rose gum): 104428216
Entry
104428216         CDS       T03547                                 
Name
(RefSeq) cell division cycle 5-like protein isoform X1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104428216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egr03041]
    104428216
   03400 DNA repair and recombination proteins [BR:egr03400]
    104428216
Spliceosome [BR:egr03041]
 Complex B
  Other components
   Prp19 complex
    104428216
 Complex C
   Prp19-CDC5 complex
    104428216
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104428216
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 104428216
NCBI-ProteinID: XP_010039513
UniProt: A0A059D2P7
Position
2:22945566..22953662
AA seq 971 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDNRHRKRKRKGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPKFPT
TIEELEGKRRVDVEAQLRKQDMAKNKIAQRQDAPSAILQANRLNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLVGNEELMGGTSATHALLANHAQTPHQGMTPLRTPQRTPAGK
GDAIMMEAENLARLRESQTPLLGGENPDLHPSDFSGVTPRKKEIQTPNPMMTPSMTPGGG
STPGGGSTPGGGSTPRLGMTPSRENLSFGMTPKGTPIRDELHINEEMDMNEGAKQELRRQ
ADLRKNLRSGLSNLPQPKNEYQIVMQPVPEDNEEPEEKIEEDMSDRIAREKAEEEARQLA
LLRKRSKVLQRELPRPPAASLQLIKDSLLRTEGDKSSFVPPTLIELADEMIRKELLSLLE
HDNAKYPLQDNTTKGKKKAKNSANGSTVPVIEDIEEDDMKEADSMIKEEAQYLRVAMGHE
SEAFEEFVDAHKTCLNDLMFFPTRNAYGLSSVAANAEKLAALQNEYHFAKARIDEDHEKA
QRLEKKVKTLTFGYQMREKTLRDQIESTFKQLDTAGTELECFRALQKQEQLAASHRINSL
WEEVQKQKELERTLQMRYGALVAELERGRHLFDCYRAEEQKQEEIAASNQALEVDNAATD
EAVSSNQTEEIEHPMDSHQLFDGNVGQESHAAENAHADDINVSTAASSVGAVDMEDEKPH
EVSVGTELIFESTEQVVVDSTKSREKLDVEDRDPAMEMRNSDGPSTEQIEHGSATPPQIE
HGSATPPHASE
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaagggaggtgtttggaagaacaccgaggatgagatccttaaggcc
gcggtcatgaagtatggcaagaatcagtgggcccgcatctcttccctcctcgtccgtaag
tccgccaagcagtgcaaagcccggtggtacgagtggctcgatccctccatcaagaagacg
gaatggacacgagaggaggacgagaagttgctgcatcttgccaagctcatgcctactcag
tggaggaccattgcacctattgttggccgtacgccctcccagtgcctcgagcggtatgag
aaactgcttgatgcagcctgtgctaaggatgaaaattacgaacctggagatgacccgagg
aaattgcggcctggggagatcgatccgaacccagagtcgaagcctgcgcgtccggatcct
gttgatatggatgaggacgaaaaggaaatgctttcggaagcaagggctcgattggccaac
actaggggcaagaaggctaagaggaaagctagggagaagcaactggaagaggccaggagg
ctagcttctttgcagaaaaggagagagctgaaggctgctggtattgataataggcacagg
aaaaggaaaagaaaggggatagactacaatgcggaaattcccttcgagaaaaggcctcct
ccaggttttttcgatgttgctgatgaagatagaccagttgagcagcccaagtttccgacc
acgatagaggaacttgaaggaaaaagaagggtggatgtggaagcacaactaaggaagcaa
gacatggctaagaataaaatcgcgcagcggcaggatgcaccttctgctatacttcaagcc
aacaggctaaatgaccctgaaactgttaggaagaggtcaaaattgatgcttccagctccc
caaatatccgaccatgaacttgaagagattgccaagatgggttatgctagtgacctggtg
ggtaatgaggaactgatgggagggacctctgcaactcatgctcttcttgcaaatcatgct
caaacaccacatcagggaatgacacctttacggacaccacaaaggactcctgctggtaaa
ggtgatgctatcatgatggaagctgaaaatcttgcacgtttgagagagtcacaaacgcca
ttattaggtggtgaaaatcctgatttgcatccttcggatttttcgggggtcacgcctagg
aaaaaggaaatacaaacgccaaatcctatgatgacaccttcaatgactccaggagggggc
tcgactccaggagggggctcgactccaggagggggctcaactcccagacttggcatgact
ccatcaagggagaatctttcttttggtatgacgccaaaaggaactcccatcagggatgag
ctccatataaatgaagagatggatatgaatgagggtgcaaagcaggagctaaggcgacag
gctgatctgagaaagaatttgcgctcaggtttaagcaatcttcctcaaccaaagaatgag
tatcaaatagttatgcaaccagttccagaagataatgaggaacctgaggagaagattgag
gaagacatgtctgataggatagctagagaaaaagctgaggaagaggcacggcagctggca
ctgcttaggaagagatcaaaagtattgcaaagggagctccctcggcctcctgctgcctct
ctgcaattgataaaggattccttgttgcggacagagggagataagagttcatttgtccca
ccaaccctgattgaattggctgatgaaatgataaggaaggagcttctctcgttattggag
cacgataatgcaaagtatcctctccaggataatacgactaagggaaaaaagaaagctaag
aactctgcaaatggtagtactgttcctgtgattgaagatattgaggaggatgatatgaaa
gaggctgattccatgattaaggaagaggctcagtaccttcgtgtagccatggggcatgaa
agtgaagcatttgaagagtttgttgatgcgcacaaaacttgcttgaatgatctcatgttc
ttccctactcgtaatgcctatggactctcaagtgttgctgcaaatgcagaaaagcttgct
gccttgcagaacgaatatcattttgctaaagcaaggattgatgaagatcatgagaaggcg
cagcgactggagaagaaggtcaaaactctcacattcggctatcagatgcgggagaagact
cttcgagaccaaattgagtcaaccttcaagcagctggacactgcagggacagaactcgag
tgtttccgagctctgcagaagcaagagcaattagcagcttcacacagaataaatagtttg
tgggaggaagttcagaaacaaaaggagcttgagcgaactctacagatgcgctatggtgcc
cttgttgctgagctggagagaggaaggcatctctttgattgttacagagcagaggaacaa
aagcaagaggaaatcgcggcaagtaatcaagctttagaagtagacaatgctgcaacagat
gaagcagtttcgtcaaatcaaacagaagaaattgagcatcctatggactcccatcaattg
tttgatggaaatgtgggccaggaaagtcatgctgcagagaatgctcatgcagacgacata
aatgtttcgactgcagcttcctctgtaggtgctgtcgatatggaagatgaaaaacctcat
gaagtatcggtgggaacagaactgatttttgaatctactgagcaggtggttgtggatagc
acaaagagcagggagaaattggatgttgaggatcgagatcctgctatggaaatgagaaac
tctgatggaccatcaactgagcagattgaacatgggagtgcaacccctccccagattgaa
catgggagtgcaacccctccccatgctagcgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

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