KEGG   Eucalyptus grandis (rose gum): 104430512
Entry
104430512         CDS       T03547                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 1 isoform X2
  KO
K12194  charged multivesicular body protein 4A/B
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03250  Viral life cycle - HIV-1
egr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104430512
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104430512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:egr04131]
    104430512
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:egr04147]
    104430512
Membrane trafficking [BR:egr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    104430512
Exosome [BR:egr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104430512
  Exosomal proteins of other body fluids (saliva and urine)
   104430512
  Exosomal proteins of colorectal cancer cells
   104430512
SSDB
Motif
Pfam: Snf7
Other DBs
NCBI-GeneID: 104430512
NCBI-ProteinID: XP_010041559
Position
3:11110720..11113644
AA seq 237 aa
MLAVVKKCILQVRMLVKHLHLHISLLRCGFILLDCRLCLVYTYNYSRLSFAYLTGSVVPS
VLLSVQTLRMLEKREKVLIKKASQEVEEAKELSRANIKRVAILCLKRKRLYEQRIEQLRY
FQLPIRDQIIMLEGAKARTMTVDALRTRAAAMKAMQEAMDTINEQNETMKQVQEALSAPS
GAAAVFDEDELEAELEELKGPELEEQLLLPAATASAPAPPVPQGTGKEDELADEMAF
NT seq 714 nt   +upstreamnt  +downstreamnt
atgttggcagtagttaagaaatgcatacttcaggtacgtatgttggtaaaacacttgcat
ctgcatatctctttattaagatgtggatttattttattagattgtaggctttgcttagtc
tacacatataattacagtaggttatcatttgcatatttgactggttcagttgtaccctct
gtcctcctttctgtacagacactccgaatgctggagaaaagggagaaggttcttataaag
aaggcttctcaagaggttgaggaagcaaaggagctctctagagcaaatattaaaagggtg
gcaattctatgcttgaagaggaagaggctgtatgaacagagaattgagcagcttagatat
ttccaacttccgattcgcgatcagataataatgttagaaggagctaaagcaagaaccatg
actgtggatgctctgagaaccagagcagctgcaatgaaagcaatgcaggaggcaatggat
acaattaatgaacaaaatgagactatgaaacaagtgcaagaggcattgtcagctccttct
ggtgcagcagctgtctttgatgaggatgagcttgaggcagagcttgaagaactgaaaggc
cctgagttggaagaacagctcctcctgcctgccgcaacagcttctgctccagctccccct
gttcctcaggggacaggcaaggaggatgagcttgctgatgagatggcattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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