KEGG   Eucalyptus grandis (rose gum): 104432609
Entry
104432609         CDS       T03547                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104432609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egr03041]
    104432609
   03009 Ribosome biogenesis [BR:egr03009]
    104432609
Spliceosome [BR:egr03041]
 Complex A
  U1 snRNP components
   U1 related factors
    104432609
 Complex B
    104432609
Ribosome biogenesis [BR:egr03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    104432609
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW RSRP
Other DBs
NCBI-GeneID: 104432609
NCBI-ProteinID: XP_039163008
Position
2:37845348..37853487
AA seq 1194 aa
MGLGAYNIAGYGNGGVSIDFLGPRYAPDDPTLPKPWKGLIDGSTGNLYYWNPETNVTQYE
KPAALPPPLPEGPPPSASSTPQLASNPAAQAMQQNGLVAHQGRHMAQAALGLQQQVLPGN
QLPQQHVAFQQGSQTGQSGQPLVLPANYSALQQGGYAPHQMGMQLMQMQQQQQQQQQMLP
QTAQQMQQHHPQQLQQHQLGQQMPQQSGQQMSQIAIEPVSQQAGQKMMQHPGSQMAHPQV
HQLSHQHVQFMGYKQSPPQEQQSSQQQTPSGALGQSLQMQQEYRAAYPKREEVDFQQVNQ
VGFSPPQFQPAVASSAQNLPPGSNPGQIPQMGIHSGQVPPYGRFPVNMHQGSSITQFQPA
GAGSYSQKQSPEFQNQMAAPMMHAQQPNVPPAGLRMGYEDNLHSRSGREYHHNADKEGPM
KSPQQPKLAAIPVARNPQAMTMGNSPFQNFAPGHGAGLHAPHGNVMPNMYNHAMGGPPFT
NDVPGTPYGGPSDVSNLTPAEAYRQQHEVNATGDNVPAPFMTFEATEFPPEILREMHSAG
FAFPTPIQAQTWPIALQSKDIVAIAKTGSGKTLGYLIPAFMLLRRRRNNPQKGPTVLVLA
PTRELATQIQDEAIKFGRSSRVSCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEM
KQIDLSQISLLVLDEADRMLDMGFEPQIRKIVNELPPRRQTLMYTATWPKEVRKIAGDLL
VNPVQVNIGSVDELAANKSITQHVEVVPQMEKQRRLEQILRSQERGSKVIVFCSTKRLCD
QLARSIGRNFGAVAIHGDKSQGERDWALNQFRSGRSPILVATDVAARGLDIKDIRVVINY
DFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAADLIKVLEGADQQVPPEVREVAS
RGGSGFGKDRGRGSRFDSGGGGGRWDSGGRVGMSGGDFGGHGGMGGGNFGGRGGTRDGNF
GGRGGIRDGGFGGRGGGRDSFGNRGGRGEFFPRRGRGPRGFGGPPGGGQGGWDRNDRGPN
DRFDMDGRGGYARGRGRGRFGSRRELPDMGRGRSYSRSPDMVRTWGSRSRSRSRSRSRSR
GRSRSWSRSRSRSRSRSWSRGRSRSYSRSPSRSRSRSRSRSYERNRRPRVSKFDQREPDA
SGLGVPPGSEAALAPPVGPSDTFSGVEPAGDLPLVADTMIVPPATEAEHSVAEP
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgggattgggcgcttataacatagcgggttatggcaacggtggagtcagcatcgacttc
cttggtccacgatatgccccagatgatccaactcttcctaaaccatggaagggattgatt
gatgggagcactggtaacttgtattattggaatcctgagaccaatgttactcagtacgag
aagccagctgctttgcctcctccattgccagaaggcccacctccctctgcctcttctaca
cctcagctggcttcaaatccagctgcccaagcaatgcaacaaaacggcttggtggctcat
cagggacgacatatggcacaagctgcgttagggctacaacagcaggtcttgcctggaaac
cagttacctcaacagcatgttgctttccagcaaggatctcaaactggccaatctggacaa
ccactggttcttcctgctaattactctgccctgcaacagggaggttatgcaccacatcaa
atggggatgcagttgatgcagatgcagcagcagcagcagcagcagcagcaaatgctgcca
caaacggctcaacaaatgcaacagcaccaccctcagcaattgcagcagcaccagctgggc
cagcaaatgccacagcagtctggacaacaaatgtcacagattgctatagagccggtgtca
cagcaagctggtcagaaaatgatgcagcatccaggctctcagatggctcatcctcaagta
catcagctttcccaccagcacgtgcaatttatggggtataagcaaagtcctcctcaggag
caacaaagttcacaacaacagaccccgagtggtgcactaggacagtcgcttcagatgcaa
caagaatacagagcagcatatccaaagagggaagaagttgattttcaacaggttaatcaa
gttgggttttctcctccacaatttcaacctgctgttgcttcatctgctcaaaacctgcct
cctggatccaacccagggcagatacctcagatgggtatccattctggtcaagttccacca
tatggtcgttttccagtgaacatgcatcaaggaagctccattactcagttccagccagct
ggggctggctcatatagtcagaaacagagtcctgagtttcagaaccagatggctgccccc
atgatgcatgcgcagcagcctaatgtgcctccagcggggttgagaatgggttatgaagat
aatttacacagtagatccggaagggaatatcaccataatgccgacaaggaaggaccaatg
aagagtccgcagcagcccaagcttgcagcaatacccgtggcaagaaatccgcaggcaatg
acaatgggtaattcgcccttccaaaattttgctcctggacatggtgctggattgcatgct
ccacatgggaacgtgatgcctaacatgtacaatcatgctatgggaggtcctccatttaca
aatgatgttcctggaactccttatggtggaccttcagatgtttccaatctcacacctgct
gaagcgtatcgtcaacagcatgaagttaatgcaacgggtgataatgtgccagcaccattt
atgacatttgaagctactgaatttcctccagagattctgagagagatgcattctgccggt
tttgcttttcccacgcctatacaggcacaaacatggccaattgcactgcaaagcaaagac
atagtggcaattgctaaaactggttcgggaaaaacattagggtacttgattcctgccttc
atgcttcttagaaggaggcgtaacaatcctcagaagggcccaacagtgctggttttggcc
cctacacgagagcttgctactcagatacaagatgaggctatcaagtttggccgttcgtca
agggttagttgcacgtgcttgtatggtggagctccaaagggaccgcagctgaaggaatta
gatcgaggagctgacattgtggtggcaactcctggacggctaaatgatatccttgaaatg
aagcagatagacctaagccaaatatctctccttgtgcttgatgaggcagatcgcatgctt
gacatgggatttgaacctcagatccgtaagattgtaaatgagcttccacctcgcagacaa
actctgatgtacacagcaacatggcccaaagaagtgagaaagatagcgggtgatcttctt
gttaaccctgttcaggttaacattggcagtgttgatgagcttgctgctaacaagtcaatt
acacagcatgttgaagtggtaccccaaatggaaaaacagcggcgtctggagcagatcctt
cgttcccaagaacggggttctaaggtaattgttttttgttctacgaagaggttgtgtgat
cagcttgcgcgcagcattgggcgtaattttggagccgttgctattcatggagacaagtct
caaggcgagagagactgggctctaaatcagtttcggagtggaaggagccctatattagtg
gccactgatgttgctgcccggggccttgacataaaagatatcagggtagtgatcaattac
gatttccctactgggattgaggattatgtccaccgaattgggagaactgggagggctggt
gcaactggagtgtcatatactttcttctctgagcaggactggaaatatgcagcggatttg
ataaaagtcctagagggggcagaccagcaagtcccccccgaggtgagagaggtggcttct
cggggtgggtctggttttggcaaagatcgtggaaggggcagccgatttgattctggtggt
ggtggtggacgttgggattcagggggtcgtgttgggatgagtggtggtgattttggtggc
catggtggtatgggtggtggcaactttggtggtcgtggtggtacgagggatggaaacttt
ggtggtcggggtggaataagagatggtgggtttgggggacgtggaggaggccgggatagc
tttggaaaccgtggtggaagaggcgaattctttcccaggcgtggtcgaggaccccgagga
tttggtggaccaccaggcggcggtcagggtggttgggataggaatgaccggggcccaaat
gatcggtttgatatggatggacgtggcggatatgcacgcgggcgtggacgggggcggttt
ggtagtagaagagagcttccagatatgggtagaggtagaagttacagtcgtagcccggat
atggttcgaacgtggggcagccggagccgcagcagaagtcgtagcagaagccgaagccgt
ggtcgcagtaggagctggagcaggagcaggagtcgcagccgaagccggagttggtcaagg
gggcggagccgtagctatagccggagccctagccggagcaggagccggagtcgcagccgc
agctacgaaagaaacaggaggcctcgtgtttccaagtttgatcagagagaaccggatgct
tcaggcttaggtgtccctcctggttcagaagctgcacttgcaccgccggttgggccatca
gatacattttcaggcgttgagccggctggggatctgcctttggtagctgatacaatgatt
gtgcctcctgcgactgaggcagagcattcagtggcggagccatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (97)   
   KEGG ORTHOLOGY (1)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (110)   

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